Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1975 ATGGCATCTAAAAGGACCTTTGACGACGAGGAAGATCATCAAGGTAATGATGACAGAGATCTTGGACGTCTCGCTAAGAGGAGACATGGCGACCCACAAGAAGCCGAGGCCATGTTCATTGCTTCTCTTATTGCCTCGCACTTGAGACCTGCAATTCAAAAAGAGATTAAAGAGGGGCTCCGATCTATGTTCCGGGGTTGCGCATGCCTGTGTTCCCCCCGATCATCCATTAACCAACAGGGTGGCGCTTCTACTTCTGGAGGCAGAGCCATGCAATTGTGCTTCGTGAATAAACTGCCTATAGAATTTTTCACCACGTTCAATATCACAGCTGAGGACGGTGGTCCAGTTCAAATTGAGCTGCGTTATGCTGGATCGCAACAACGCGTAGTGACGGAACAAGTTTCTAACATGAAGGTTCAGATCTGTGTCCTAGATGGTGATTTCGGTAAGGACGGAAACGAGGACTGGAGTGCAGATGAATTTAATGCCCAAATTGTGAAACCAAGAGAGGGGAAGGGGCAATTACTGAAAGGAGAGACTGTTATTAAACTTGAAAAGGGGTTTGCTTGTATCAATAACAAGATCGAGTTTACTGATAACTCTATCGGCACAAGAAACAAAAAGTTTCGGTTAGGAGTTAAATTTCTGCAATCTACTTCCGTTAGCGTTAGCGTTAGGGAAGGCAGAAGTGAAGCCTTCAGGGTTAAGGATAAACGAGGAGAGCCGTACAAGAAACGCGACCGTCCCTCGTTGAATGATGAGGTATGGTGTCTGAAGAATATAAGAAGAAACGGTGATCTTCACAAGGATCTTTTGAAGAATAAAATAAAAACTGTCAAGGATCTTTTGCGCTTGAACACAATCGGTTCATTACGGGAGAAATTCGGCAAGGTTAAAAAATGGGACGAAATCATCGAACATGCTGAAAAATGTGCAGTTGACGATGATGGGTTCTACATGTATCGCTATGATGCAACCGTTTCCCTTGTCTTGAACTGCATCTATAAGGTTGAGGCGATTTTTTATGGGCAACACTATCGGTCTCTGCAATCTCTGAATTTGGAGGAGCAGCGTTTGGTGGAAAGAGTTAAGCAGGAAGCATACCAAAATTTGCAGAATCTGGTGCCAATTCCGACGCCACCACCACATGACATAGTGAAGACTTTGACGGGTACACAATACGGTTCACCAGATCAAGGTCAGCAAGGGCAATCAGAACTTTGGATATCCACCACCTCAACATCAATTGTGCATGAAGCGCCACTAAACTTGTCTGGTGGGTCGCAGGTTGTCCCCGTTGAAACATATAATATTGATGATGGAACCGGATGGGACATTGGTCAATTTGAAAGTTACATTCTTCCTAACCAATTATTGGAGCCAGTTAATCCTTGCTCTTTTCCCTATGGCGATGGAGCAACATCTAGCAATCATTCGTTTTTCCTCAACCCTGCTGTGTATACATCAAGCAAAGGGAAAAGCAAAACAGTTTGGCAGAAGACTCGAAACATTCTCAAATGGGTCATACCTCATGTCACCAAATGGAAGGTGTTCCGACCTCAAATCCTTCAACATTATTAG 1584 0.4413 MASKRTFDDEEDHQGNDDRDLGRLAKRRHGDPQEAEAMFIASLIASHLRPAIQKEIKEGLRSMFRGCACLCSPRSSINQQGGASTSGGRAMQLCFVNKLPIEFFTTFNITAEDGGPVQIELRYAGSQQRVVTEQVSNMKVQICVLDGDFGKDGNEDWSADEFNAQIVKPREGKGQLLKGETVIKLEKGFACINNKIEFTDNSIGTRNKKFRLGVKFLQSTSVSVSVREGRSEAFRVKDKRGEPYKKRDRPSLNDEVWCLKNIRRNGDLHKDLLKNKIKTVKDLLRLNTIGSLREKFGKVKKWDEIIEHAEKCAVDDDGFYMYRYDATVSLVLNCIYKVEAIFYGQHYRSLQSLNLEEQRLVERVKQEAYQNLQNLVPIPTPPPHDIVKTLTGTQYGSPDQGQQGQSELWISTTSTSIVHEAPLNLSGGSQVVPVETYNIDDGTGWDIGQFESYILPNQLLEPVNPCSFPYGDGATSSNHSFFLNPAVYTSSKGKSKTVWQKTRNILKWVIPHVTKWKVFRPQILQHY* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1975 527 MobiDBLite consensus disorder prediction 1 24 - -
Gso3g1975 527 Pfam Calmodulin binding protein central domain 251 312 IPR046830 -
Gso3g1975 527 Pfam Calmodulin binding protein C-terminal domain 320 377 IPR046829 -
Gso3g1975 527 PANTHER CALMODULIN-BINDING PROTEIN 60 G 1 519 - -
Gso3g1975 527 PANTHER OS02G0177800 PROTEIN 1 519 IPR012416 GO:0005516
Gso3g1975 527 Pfam Calmodulin binding protein-like N-terminal domain 91 239 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1975 Gso-Chr3 45264297 45267483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1975 3 376 Calmodulin-binding Proteins AT5G57580 35.142 9.89e-56 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1934 19 48037579 48041588 Gso3g1975 3 45264297 45267483 GST