Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1974 ATGGTATCAAAAAGGCAATCTGGTCAGAGGCACGAAGGCAGGGGCAAAGTTCCAATTCAGGAGCAAAAACAAGCATCAATCAGTGGCCTTAGAAATGTGATCAACGCGCTATGGATGAGTGATAAATCTTCCTATTTGGAAAATTTTCTGCGAAGAGTGGTAAGAGAGGTGGTGGAACAAAAAATCCAGGACCAAGCTCATCTATTTTCAAGGGAAAGGGTTGGTGAGGCTGGCATATCCGGAGCCAAACATTTAAAGTTGTGTTTTATTAATAAGCTGCCTGAAACAATTTTTACCCGGTCTAGTATAATAACAAAAGATGAATCATTTCTTCAAATTGCGTTATTTGATGTTAGAACTGAGTCTGTAGTAAATGATGGTCCTCTTTCCTCACTAAAGATAGAGATCTGTGTCCTGGATGGAGAGTTTGGATCTCATGGCTGTGAGGATTGGACTGAAGATGAGTTCAATTCCAATATTTTACGCGAAAGAGAAGGTAAAGAGCCTCTATTGATTGGAGAGAGATTTATTACGCTAAAAGGTGGAGTTGGTTGTATAACTAAAATTGCCTTCTCTGACAACTCGAGATGGCAAAGAAGCAGAAGGTTCAGGATTGGAGTCAAAGCTGTGCAACCAACTTCCAATGGAGAAAAGATTCAGGAGGGTAGAAGTGAACCTTTTGTAGTCAAAGATAACAGAGGAGAGTCCTACAAGAAACACTACCCTCCATACTTGAAGTTGAATGATGATATATGGCGTTTGAAGAAAATTGCTAAGGAAGGAAAAATCCACAAGCAGCTCTCTTTGCATGGAATTCACAACGTCAAGGATCTCTTGCGTTTTTACATAACCAACGAACCTTCATTATATGAAACGTTTGGAAATATTCCAAAGAAGTCATGGTTAGTAATCACTGAGCATGCCAAAGCCTGTGAGATAGATGATTACCAGCTTTACAGCTATCACTCAGAAGAACTGCAAGTAGGCCTGCTATTCAATTCCATCTACATCCTTGTGGGAGTGACATTCGATTGGCAAAATTATTATTTACCTGATACTCTCAATCCTAGAGAAAAGCATTTGGTGGAAATAGTGAAGCATCAGGCCTACAAAAATGTGTACGATTTGAAATTGATTGAAGAGACTAAGTTGAACTATTTAAATCTAGCTGCATGTCTAAAAGCAAGGCAGTCTGACACTCAAGATCAAGGTCTGCAACATGTTAATATCTCAACTGCACAAGGTCAATCAGTAACATTTCCAGATTATAGTCAACCATCTATCTCTCCTTCATATACTGATGAAGGAATGCATGACCACCAAGTTTATGCTGATCCACTGCCAGGCATAACAGAGATGTCACAAAACAGTCATCTGTTAGATGAACTTTCCTCTGAAATGTACACTGAAGAGGATAGTTGTGACCTTAATGGATCGCAATTTCCATTCGTGCGAGGTGGTTATTCAACAGAGAATGAAAGCTCAGAGATTCAATTCATAGATGATTGTTCTCCTTACACAACATGGGAGCCAGAAACTGGCATTTTATTTGGTTCTCCTGTTGGAGCAGAATTTAGCAGCTATTCTACTTTCATCAATTCGGATGTGGATATATCAAGTAGTGGCAAAACCAAAGCAGTGTGGTATAAGATTCGTGTTGCTCTCAAATGGGTCATATCAGTGAAAAGGGATGCAGCTGCCAGAAGGAATGGCCATCTATTTTACCATAACTATTAG 1737 0.3955 MVSKRQSGQRHEGRGKVPIQEQKQASISGLRNVINALWMSDKSSYLENFLRRVVREVVEQKIQDQAHLFSRERVGEAGISGAKHLKLCFINKLPETIFTRSSIITKDESFLQIALFDVRTESVVNDGPLSSLKIEICVLDGEFGSHGCEDWTEDEFNSNILREREGKEPLLIGERFITLKGGVGCITKIAFSDNSRWQRSRRFRIGVKAVQPTSNGEKIQEGRSEPFVVKDNRGESYKKHYPPYLKLNDDIWRLKKIAKEGKIHKQLSLHGIHNVKDLLRFYITNEPSLYETFGNIPKKSWLVITEHAKACEIDDYQLYSYHSEELQVGLLFNSIYILVGVTFDWQNYYLPDTLNPREKHLVEIVKHQAYKNVYDLKLIEETKLNYLNLAACLKARQSDTQDQGLQHVNISTAQGQSVTFPDYSQPSISPSYTDEGMHDHQVYADPLPGITEMSQNSHLLDELSSEMYTEEDSCDLNGSQFPFVRGGYSTENESSEIQFIDDCSPYTTWEPETGILFGSPVGAEFSSYSTFINSDVDISSSGKTKAVWYKIRVALKWVISVKRDAAARRNGHLFYHNY* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1974 578 Pfam Calmodulin binding protein-like N-terminal domain 85 232 IPR046831 -
Gso3g1974 578 Pfam Calmodulin binding protein C-terminal domain 317 376 IPR046829 -
Gso3g1974 578 Pfam Calmodulin binding protein central domain 247 311 IPR046830 -
Gso3g1974 578 PANTHER OS02G0177800 PROTEIN 1 575 IPR012416 GO:0005516
Gso3g1974 578 PANTHER CALMODULIN-BINDING PROTEIN 1 575 - -
Gso3g1974 578 MobiDBLite consensus disorder prediction 1 23 - -
Gso3g1974 578 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1974 Gso-Chr3 45256923 45261473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1974 44 569 Calmodulin-binding Proteins AT4G25800 32.149 8.94e-78 255