Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1973 ATGGAGACGGAGAAAAAACGTTCCAAGGGAAGCTTCCTTAGCTTCTTTGATTGGAACACCAAATCTCGAAAGAAGTTGGTTTGGAACGATCCTGAGGTTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACCGAAGTCACGGCTCACTAGGAAAAAGGTGGATGAAATTGGAGCAAGTCCAAGTAACATTCAAAGTTGTGATTTTGACAGTACCCTCTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCGAGACTCATGGGTCTGGATTCATTGCCAGCTGCAGCAGCCACTGAGCTCTCCTGTACTTCATTGTATGGCTCTAAATCTCATGGAGCTTCACATTGTAATGAGGGTGCTCTTCACTCAGTGGATGACTTTTTCCCTGCAGACTACATAAACACACTGCTTAAGCCAGAGAAGTCTTCTTTGGAAGCCATGGAATCAAGGGCACGAAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCAGTTACTCACAATAAACTGTTGTCTCCTATCAAGAGTCCTAGTATTCTGCCACCAAAGAATGCAGCTCATGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATTTTAGGAATAGAACAGCATTAACCGAGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTTGAAGCTGCACAATATATATCCATGCCTGGAAAGCTCGAGAATCTGAGCAATTCCTATCCTGCAAATGGCAAGCTTAGTGAGAGGAGCAGTAATTTGTATAAATGCACTTCAGCATTCAAGGGTTCAAGAGTTTTAGAAAAAAATAGTTCTTGCCATTCAGCCAGTAAAGGAAAATCAGTTTCACTTACAATACAAGCCAAAAACAATGCTCATAGTAGAGATACATTGATTTCAAATGGTGATAGGAAATGCATGAAACAGAGAGAGAAGAATGACATAAAGTCAAATCAACTCTCAAGGAGCCAGAAACCAAGTAAACAAAAAGCTATGCAGCAGAGACCTTGCTCAAGCCGGAATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAAAATAGCATGGCTGCCAAGGGTAAATTAACTTCAACAATAGATTCCAATAAGCCAACAACACGAGCTTCATCTCCAGAAACTTCTGGAATAAGGAAGACAATGAACAAGGGTGCTAAAACTGCAAATATTCAACCTAAAAGGTCAAGCAGTAGGGCAACTGACAACCAAAAGCAGTTTCCAAGATCCAAAGCAGTGAGTATTTCCCAGAAGAAAAAGATTAGCAGAGATGTTCATGAGGCAAGAGGTCCTGATGAAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACTGATGGAAGTTTTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGTATGCCTGAGTCATCATCCTCTACTGAGCAAGTGATGGGAACCAGAAATAGAATTGATGTCAACTCTATTGGGCATAGTGATAATCTTTATCCCAAAAAATTATCATTATCTCCGCCAGGGCAACCTATGATAGATAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTGCAAGAATTGACATCTAGAATTAACTTACCTCAATGTACCTTGGCCACAGAAGGGTCTTCTACTGGTTTGAGATCTAGTGTGCAAGATCAAGTTCCCAGTGTGTCAAGCAACACGCCTAAGGAACAAGACAAAAGCTTTTGCAGTGACCTGTCTAGTGATAAACTGGATAGCATGCATAACTCTCATTATTGTTCAAGTGATGACCCAGTGCTTAACATGAATCGGCAACTGCTGACATCAGAAGTAAGTGAAGATCCTAGCTGTAGCAGCAACAGTGAAAGTGGAAATGATCTAGTTTGTTGGCATTCCACTGCTGTTGCAGGTTTTGAAACTCCTTTTGTCAGCGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAGTTTATTCTTCCACACAAGATGAAGAAGTATCTAGTTTTACCCAGATAAGTGAATCTGTATCACTTGAAAGTGAGGTGAAAGGGTCAGAGCAAAGCTCTTCACCATTGGGGGGTGGAAATATGGCCATCAAACAAATAAGTAGAACATCAAATTCGGTTGATTTTAAAAGATCAAGGAACACAGTACTTGAATATGTACATGATATTCTTTGCAATGCAGAGTTTACGGCAGAAGAATTTGTCACGGGTCAAACTAGTACACTCATAATGCCCAATGTCTTTGATCTGTTGGAGAATCAGATTTATGGAACAGAAAACTTCGGAGAAGATTACTCTAAGCTTGAAAGGAAGGCTATATTTGACTGTGCGAGTGAGTTCCTAGAGTTGAGATGTAAGCAAGCTTTTGTTGGAACGTGCAAAGCATGGCCTGGATGGGTGATGTCAGTTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAGTTGCTGGGTATTAGAAGCATGGAAGAGACAATGGTGGATGAGCTTGTCACCAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGGGGGACATTATGTCTTATTTGGTTAATGAATTGGTTTCTGATTTGTTACTTGTCTAA 2739 0.4082 METEKKRSKGSFLSFFDWNTKSRKKLVWNDPEVSKQGKENVENLPKSRLTRKKVDEIGASPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDSLPAAAATELSCTSLYGSKSHGASHCNEGALHSVDDFFPADYINTLLKPEKSSLEAMESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPSILPPKNAAHVMEAAAKIIEASPRPYFRNRTALTEPSSVPLRILNLKERFEAAQYISMPGKLENLSNSYPANGKLSERSSNLYKCTSAFKGSRVLEKNSSCHSASKGKSVSLTIQAKNNAHSRDTLISNGDRKCMKQREKNDIKSNQLSRSQKPSKQKAMQQRPCSSRNSNVLGQNNQKQNSMAAKGKLTSTIDSNKPTTRASSPETSGIRKTMNKGAKTANIQPKRSSSRATDNQKQFPRSKAVSISQKKKISRDVHEARGPDEVNNFGSKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESSSSTEQVMGTRNRIDVNSIGHSDNLYPKKLSLSPPGQPMIDSDALSVLLDKKLQELTSRINLPQCTLATEGSSTGLRSSVQDQVPSVSSNTPKEQDKSFCSDLSSDKLDSMHNSHYCSSDDPVLNMNRQLLTSEVSEDPSCSSNSESGNDLVCWHSTAVAGFETPFVSESYLDSEDSAYGSTVYSSTQDEEVSSFTQISESVSLESEVKGSEQSSSPLGGGNMAIKQISRTSNSVDFKRSRNTVLEYVHDILCNAEFTAEEFVTGQTSTLIMPNVFDLLENQIYGTENFGEDYSKLERKAIFDCASEFLELRCKQAFVGTCKAWPGWVMSVQRKSWMAEELYKELLGIRSMEETMVDELVTKDMSSGCGKWLDFDVEAFEEGLEVEGDIMSYLVNELVSDLLLV* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1973 912 MobiDBLite consensus disorder prediction 444 460 - -
Gso3g1973 912 MobiDBLite consensus disorder prediction 578 612 - -
Gso3g1973 912 MobiDBLite consensus disorder prediction 342 442 - -
Gso3g1973 912 Pfam Domain of unknown function (DUF4378) 753 904 IPR025486 -
Gso3g1973 912 MobiDBLite consensus disorder prediction 316 461 - -
Gso3g1973 912 MobiDBLite consensus disorder prediction 321 341 - -
Gso3g1973 912 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 912 - -
Gso3g1973 912 Pfam DUF761-associated sequence motif 77 101 IPR032795 -
Gso3g1973 912 PANTHER DUF4378 DOMAIN PROTEIN 1 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1973 Gso-Chr3 45242942 45247589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1973 3 910 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.147 3.48e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1973 - - gmx:102663635 1768.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1933 19 48021348 48026033 Gso3g1973 3 45242942 45247589 GST
Gso3g1973 3 45242942 45247589 Gso10g1357 10 39958191 39962690 PCT
Gso10g1357 10 39958191 39962690 Gso3g1973 3 45242942 45247589 PCT