Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1967 ATGGTTAACCCAAGTACTATAATTCCCCCATCCTCCGAAGAATACACTGTTCATAATTCTATTGGATCTTCCTCTCACCAAATGCCACCATCCTCAAACAAAGGTTGTGGTAGGCCCCTTGGATCCAAGAACAAGCCAAAAATACCCCTCGTTATTAACCAAGATAGCGATCTTGCCTTGAAACCCATCTTCATTCAAGTCCCGAAAAATTCTGATGTTATTGAGGCCGTGGTCCAATTTGCGCGCCATTGTCAAGTTAGCATCACAGTGCAATGTGCATCTGGGTCTATCTTGGAAGCCACTCTCTGCCAAACTCTTCCTGACACTTCTACTTTCGTTGTTTTTGGACCCTTTACTTTGATTTCCCTCACCGGAACCTACATTAATAATAACCTTTCCGCTTCTTCTTCATCTTTATCATCACCATCTAATCTTGACCATAACTGTTCTTTTACGATTTCCTTTTGTTCAAATTTAGGTCAAAGCTTTAATGGAATTGTTGGAGGAAAGGTTATAGCAGCCGATGATGTTACTGTAGTGGTTACTATTCTCAAAGAACTTTGA 564 0.4078 MVNPSTIIPPSSEEYTVHNSIGSSSHQMPPSSNKGCGRPLGSKNKPKIPLVINQDSDLALKPIFIQVPKNSDVIEAVVQFARHCQVSITVQCASGSILEATLCQTLPDTSTFVVFGPFTLISLTGTYINNNLSASSSSLSSPSNLDHNCSFTISFCSNLGQSFNGIVGGKVIAADDVTVVVTILKEL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1967 187 MobiDBLite consensus disorder prediction 1 40 - -
Gso3g1967 187 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 184 IPR005175 -
Gso3g1967 187 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 186 IPR014476 GO:0003680
Gso3g1967 187 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 184 - -
Gso3g1967 187 Gene3D - 60 187 - -
Gso3g1967 187 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 25 186 - -
Gso3g1967 187 MobiDBLite consensus disorder prediction 1 32 - -
Gso3g1967 187 ProSiteProfiles PPC domain profile profile. 55 187 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1967 Gso-Chr3 45207005 45208450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1967 37 181 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.162 2.05e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1967 - - gmx:100527104 347.051