Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1950 ATGGGTGCCGGTCTCGTTGCGTTCCTCTTAATGGTTCTTGTACAATTGGTCTATGCAGTGATGAACATTACTTCAAAGCTTGCAATAGAATCTGGCATGAGCCCTCTTGTCCTTGTTGCTTATCGACAACTCTTTGCAACTGTGTCCATTGCTCCCTTTGCTTATTGGCTTGAATGGAATACGCTTCCCAGGATCACAAAACGTCTTATGCTTCAGATATTATTTTCGTCCCTGACAGGAGTTACAGGAAATCAGATGCTTTATTTTGTGGGGCTGAAATATTCATCCGCTACAATTGCATGTGCACTGACCAATTTGCTCCCAGCTTTCACTTTTATCCTTGCAGTTCTCTTCAGACAAGAGAATTTGGGAATCAAGAAGAGGGCTGGGCTAGCAAAGGTATTCGGGACAATATTGTGTGTGAGCGGAGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAGATATGCTGAGAAAATGGAAGGAACTAGCTCTTCTGGCAAAGGAAACATGTTTCTAGGCCCTTTAGTCGTAATTCTTAGCACCCTTGTTTGGGCAGCATGGTTCATAATTCAAAAAGACATAAGCAAGACTTTTTCAGCTCCTTACACGAGCACTGGCTTAATGTGTTTCATGGCAAGCTTTCAATGCATCATCATTGCCGTGTGTGTCGACCACACTGCCTCAGCTTGGTCACTCCACAATGCTATGAGACTTTCCTCTGCTCTTTATGCGGGAATATTTTGCACTGGATTAGCGTATTGCCTCATGTCGTGGACCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTGCAGCTTGTCCTCACTGCCATTTTAAGCTGGGCTTTACTTCGTGAGAAATTATACGTTGGAACTGCCGTAGGGTCTCTCTTGATAGTTTTGGGTCTCTATTCTGTTCTTTGGGGAAAGAGTGAAGAGGTGAACAAGGAAGACGGTATTGAAGATGCATTTAAAGAAGCAGTCAAGGATCCGAAAAATGACATGGAATTGCAATCATATGTGTCATCCAATGTTAATAATCGTTGTGCTATTGCATGA 1101 0.4269 MGAGLVAFLLMVLVQLVYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAYWLEWNTLPRITKRLMLQILFSSLTGVTGNQMLYFVGLKYSSATIACALTNLLPAFTFILAVLFRQENLGIKKRAGLAKVFGTILCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTSSSGKGNMFLGPLVVILSTLVWAAWFIIQKDISKTFSAPYTSTGLMCFMASFQCIIIAVCVDHTASAWSLHNAMRLSSALYAGIFCTGLAYCLMSWTIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAVGSLLIVLGLYSVLWGKSEEVNKEDGIEDAFKEAVKDPKNDMELQSYVSSNVNNRCAIA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1950 366 PANTHER WAT1-RELATED PROTEIN 6 346 IPR030184 GO:0016021|GO:0022857
Gso3g1950 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 325 - -
Gso3g1950 366 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Gso3g1950 366 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Gso3g1950 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Gso3g1950 366 PANTHER WAT1-RELATED PROTEIN 6 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1950 Gso-Chr3 45070135 45073563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1950 5 325 Nodulin-like Gene Family AT1G09380 62.733 1.06e-147 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1950 - - gmx:100811613 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1912 19 47837112 47840616 Gso3g1950 3 45070135 45073563 GST