Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1945 ATGGGGTCTGAAGGTCCTACGACACCGACAACAACAATTCATGTGACAGGATTTAAGAAATTCCATGGAGTTTCAGAGAATCCAACAGAAACAATTGCCAATAATTTGACGGAGTACATGAATAAGAAGGGTTTGCCAAAGGGTTTAGTTATTGGGAGCTGCAGCATTCTTGAGACTGCTGGTCAAGGAGCACTTGTTCCACTGTACCAGAGATTACAATCCGCCGTTATTGCCAAGGACACTGAATCTTCAAATTCCAATAGAATTATTTGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGAACCAAGCTGTCAATGAGGCTAATTTCCGATGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCGGATGGTGGAATTTCGCGAACAAGGGAGACTTCACTTCCTGTTGTGGAGATCACCAAAGCCTTGGCAGAGAAGGGATATGAAGTTATGGTATCAGTTGATGCAGGCAGGTTTGTGTGCAATTACGTTTACTATCATTCCCTTCGCTTCACCGAGCAAAACGGGATCAAATCCCTTTTCGTGCACGTGCCGCTCTTCGTGACAATAAATGAAGAGACTCAAATGCAATTCGCAGCTTCCTTGTTAGAGGTGCTTGCCTCTATACCTCAGTAG 669 0.4469 MGSEGPTTPTTTIHVTGFKKFHGVSENPTETIANNLTEYMNKKGLPKGLVIGSCSILETAGQGALVPLYQRLQSAVIAKDTESSNSNRIIWLHFGVNSGATRFAIENQAVNEANFRCPDEMGWKPQKVPIVPSDGGISRTRETSLPVVEITKALAEKGYEVMVSVDAGRFVCNYVYYHSLRFTEQNGIKSLFVHVPLFVTINEETQMQFAASLLEVLASIPQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1945 222 PIRSF Pyrrolidone-crbxlat_pptds 10 221 IPR000816 GO:0005829|GO:0006508|GO:0016920
Gso3g1945 222 Pfam Pyroglutamyl peptidase 13 198 IPR016125 -
Gso3g1945 222 CDD Peptidase_C15 13 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Gso3g1945 222 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 12 218 IPR036440 -
Gso3g1945 222 PANTHER BNAA09G15240D PROTEIN 1 220 - -
Gso3g1945 222 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 220 IPR016125 -
Gso3g1945 222 Gene3D - 9 220 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1945 Gso-Chr3 45014346 45017525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1945 K01304 - gmx:100789152 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0385 18 3804163 3805903 Gso3g1945 3 45014346 45017525 GST
Gso3g1945 3 45014346 45017525 Gso10g1325 10 39566403 39569729 PCT
Gso10g1325 10 39566403 39569729 Gso3g1945 3 45014346 45017525 PCT