Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1934 ATGGAATATCGACGGACCAGTGGTAGGCAGGAAACCGGTGGCCGTGACAGAAGACAATCTAAAAGGGAACAGGCATATCAGGACTCTCTTATTGAGGATTTGTCACAGGATTTTCGTTTGCCAATCAACCACAGGCCAACAGAAAATGTTGATCTGGACAACGTAGAGCAAGCATCTTTGGACACACAGATAACATCATCTAATATTGGCTTTAAGCTCCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCATTGAGCCAATAAAATCTGGAATTAGAGATCCAAGGCTGGGGATTGGTAAGCAAGAAGAAGATGATTTCTTTACTGCAGAAGAAAATATCCAGCGAAAAAAACTTGATGTTGAGTTGGAGGAGACAGAGGAACATGTGAAGAAACGGGAGGTCTTGAGAATTTCCTGCAGTTTTTATTACCTGGTGGCTTCTTCTGCCTGCTTCGTGCACATTATGAAAATTCAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGCAAGAAATCCGAAAGGTGTTCTATTGTGATCTCTGCAACAAGCAATACAAATTGGCAATGGAATTTGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCATGGTAGTAGTAGTCGGGACGATAGGCAAAAGCGAGAACAGCAGCGTCAAGAAAGAGAAATGGCAAAGTTTGCTCAAATTGCTGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGCAACAGTTCCATCGGAATCTAAAACTGCTACTGCACTTACGGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTTCTAAAGGCAGTGGTTCCAAGATTACATTTGGTGCCAAGAAGCAAAATGTTGCAAAGAAGCAAAATGTTCCGATCTCCTCTATATTTAGTAACGATAGCGATGAAGACTAA 990 0.4182 MEYRRTSGRQETGGRDRRQSKREQAYQDSLIEDLSQDFRLPINHRPTENVDLDNVEQASLDTQITSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGIGKQEEDDFFTAEENIQRKKLDVELEETEEHVKKREVLRISCSFYYLVASSACFVHIMKIQVLAEREQKIQTEVQEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGSSSRDDRQKREQQRQEREMAKFAQIADAQKQQRLQLQQESGSATVPSESKTATALTDQEQRNTLKFGFSSKGSGSKITFGAKKQNVAKKQNVPISSIFSNDSDED* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1934 329 MobiDBLite consensus disorder prediction 217 329 - -
Gso3g1934 329 MobiDBLite consensus disorder prediction 252 323 - -
Gso3g1934 329 ProSitePatterns Zinc finger C2H2 type domain signature. 188 210 IPR013087 -
Gso3g1934 329 SUPERFAMILY beta-beta-alpha zinc fingers 184 220 IPR036236 -
Gso3g1934 329 Pfam G-patch domain 67 107 IPR000467 GO:0003676
Gso3g1934 329 ProSiteProfiles G-patch domain profile. 66 111 IPR000467 GO:0003676
Gso3g1934 329 MobiDBLite consensus disorder prediction 1 28 - -
Gso3g1934 329 MobiDBLite consensus disorder prediction 217 247 - -
Gso3g1934 329 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 1 328 - -
Gso3g1934 329 SMART G-patch_5 64 109 IPR000467 GO:0003676
Gso3g1934 329 Pfam Zinc-finger double-stranded RNA-binding 186 213 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1934 Gso-Chr3 44900435 44904119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1934 1 329 C2H2 Transcription Factor Family AT5G26610 59.337 3.75e-120 346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1897 19 47715601 47719208 Gso3g1934 3 44900435 44904119 GST