Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1929 ATGGAGAGAGTTTTGTGGGTTGACATTGCTATAGGACTTGTTGTTTTCAGCAACTGGGTCGATGGGTTCGTAGGATATGAACATCACTTCAATGAAACAGAGTTGTCTTTATTAGAGGCTCATGAAGCTTCCTTGTCCTACGCCGGGACCGAGAGGAATAATCTTCTGCTGGTAGGACTCACCCTTATTCAAAATGCTGCTGCTAAAGGAGCAGTCTGCTTGGACGGAACATTACCTGGTTATCATTTGCATCAGGGATATGGATCAGGAGCAAATAGCTGGCTTATTAATTTAGAGGGTGGTGGATGGTGTAATAATATTAGAACATGTGTTTATCGCAAGAAAACCCGGCGTGGATCATCAGATTTCATGGAAAAGGAGATACCTTTTACTGGTATATTAAGTAATAAGGCTGAAGAAAACCCAGATTTTTTCAATTGGAATAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTACTGGGGATAGTGAAGATGAGACTGCAGAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAGTCAGGCTATTCTTTCGGGATGCTCTGCGGGTGGCCTGGCTACTATTATTCATTGTGATGAATTTCGTGGTCTCTTTCCAAGGACCACCAAAGTGAAATGTCTTAGTGATGCTGGGTTGTTTCTTGATGCGATTGATGTATCTGGTGGGCATACCCTTAGGAATTTATACAGTGGAGTTGTAGGATTGCAGGGAGCACAGAAGAATCTGCCACAGATTTGTACTAATCACCTTGATCCCATCTCGTGCTTCTTTCCTCAAAACTTGATTGCCAGTGTTAAGACTCCGCTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGCTTAGCTCCTCCATCTGCAGATCCCCATGGCTATTGGCATGAATGTAGATTAAACCATGCTAAATGTACTGGACCACAAATCCAATTTCTGCAAGGATTCAGAAATCACATGCTGAATGCTATTAAATACTTCTCAAGATCAAAGCAGAATGGCTTGTTTATTAATTCTTGTTTTTCTCACTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTTATCAGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGATCGAGCAGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCATCATCTGATTTTCAGATGA 1266 0.4226 MERVLWVDIAIGLVVFSNWVDGFVGYEHHFNETELSLLEAHEASLSYAGTERNNLLLVGLTLIQNAAAKGAVCLDGTLPGYHLHQGYGSGANSWLINLEGGGWCNNIRTCVYRKKTRRGSSDFMEKEIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFTGDSEDETAELQFRGQRIWAAAMEDLMSKGMRFASQAILSGCSAGGLATIIHCDEFRGLFPRTTKVKCLSDAGLFLDAIDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPHGYWHECRLNHAKCTGPQIQFLQGFRNHMLNAIKYFSRSKQNGLFINSCFSHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDRAGVKAIDCPYPCDNTCHHLIFR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1929 421 PANTHER PECTIN ACETYLESTERASE 3 420 - -
Gso3g1929 421 Pfam Pectinacetylesterase 56 400 IPR004963 GO:0016787
Gso3g1929 421 PANTHER NOTUM-RELATED 3 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1929 Gso-Chr3 44823206 44828245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1929 57 421 Carbohydrate Esterase AT1G57590 74.247 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1929 K19882 - gmx:100782401 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1893 19 47650100 47653969 Gso3g1929 3 44823206 44828245 GST
Gso3g1929 3 44823206 44828245 Gso10g1304 10 39139411 39144625 PCT
Gso10g1304 10 39139411 39144625 Gso3g1929 3 44823206 44828245 PCT