Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1923 ATGGAAGAAGCATCATGTGTATGCTTAGTTGTCATACTGATACTTGCTCTAACATTGGCATGGAGGGTGCTGAACTGGTTATGGCTAAGGCCAAAGAGGTTAGAGAGGCTCCTAAGAGAGCAAGGCCTTCAAGGAAATCCCTACAGGCTTTTGGTTGGGGATTTAAAGGAGATTATGAATATGCAAAAGGAAGTCACATCCAAACCCATGAATCTCTCCCATGATATAGTGCCTCGTGTCTTTTCCTTTCTCCAACACACTCTCAACACACATGGCAAGAATTCTTTTATTTGGTTTGGGCGAAAACCAAGGGTGATCATCACAGAGCCTGAGTTAATCAAAGATGTACTTAATAAGATGCATGATTTCCCAAAGCCTGACACGAGTCCGCTTGTCAAGTTACTTGCTACTGGTCTTTTAAACCATGAGGGAGAAAAATGGAACAAGCACAGAAGAATAATTAGCCCTGCATTCAATTTAGAAAAATTGAAGAATATGTTACCAATATTCTACAAAAGTTGCAATGATTTAATTATCAAGTGGGAGGAAATGTTGTCTTCTGATGGATCATGTGAAATTGACGTATGGCCTTTCCTTCAAAATTTATCTAGTGATGCTATTGCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAAAATATTTCAACTTCTAAAAGAGCAAGCAGAACTTGCAATGAAAGCTATAATGAAACTTTACATCCCTGGATGGAGATTTCTACCTACTGCTAACCATAGGAGGATGAAGGAAATTGATAGAGAAATAAAAGCTTCACTTACAGATATGATTAGCAACAGAGAGAAAGCACTAAAGGCGGGTGAGGCTACCGAGAATGACTTGTTAGGTATACTTTTGGAGTCAAATCACAAGGAAACTGAAGAACATGGAAACAGTAAGAATGTTGGAATGAGTCTTGAGGATGTAATCGAGGAATGCAAGCTATTCTACTTCGCAGGGCAAGAGACCACTTCAGCTTTACTTGTTTGGACCATGGTGTTGTTAAGTAGGTACCCTGATTGGCAAGCACGTGCGAGGGAGGAAGTTTTACAAGTATTTGGCAAACAAAAACCAAATTTTGATGGGCTAAGTCACCTTAAGATTGTCAGCATGATTTTGAATGAGGTTCTTAGGCTATACCCACCAGCAGTTGGCCTTAATAGAAATGTTGACAGAGATATGAAACTCGGAAACCTATCATTACCTGCTGGAGTGCAAGTTTCCTTACCAACAACTATGGTTCACCATGACCGCGAACTCTGGGGTGATGATGTGAATGAATTCAAACCTGAGAGATTTTCTGAAGGAGTTCTGAAGGCCACAAATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTGTTGGAGGCAAAGATGGCTTTGTCAACGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCTTATGCTCATGCTCCTGTTACAGTATTTACTCTTCAGCCCCAATATGGTGCTCATGTCATTTTACGTAAAGTTGAAATATAA 1557 0.3969 MEEASCVCLVVILILALTLAWRVLNWLWLRPKRLERLLREQGLQGNPYRLLVGDLKEIMNMQKEVTSKPMNLSHDIVPRVFSFLQHTLNTHGKNSFIWFGRKPRVIITEPELIKDVLNKMHDFPKPDTSPLVKLLATGLLNHEGEKWNKHRRIISPAFNLEKLKNMLPIFYKSCNDLIIKWEEMLSSDGSCEIDVWPFLQNLSSDAIARTAFGSSYEEGRKIFQLLKEQAELAMKAIMKLYIPGWRFLPTANHRRMKEIDREIKASLTDMISNREKALKAGEATENDLLGILLESNHKETEEHGNSKNVGMSLEDVIEECKLFYFAGQETTSALLVWTMVLLSRYPDWQARAREEVLQVFGKQKPNFDGLSHLKIVSMILNEVLRLYPPAVGLNRNVDRDMKLGNLSLPAGVQVSLPTTMVHHDRELWGDDVNEFKPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSTILQHFSFELSPAYAHAPVTVFTLQPQYGAHVILRKVEI* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1923 518 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 513 - -
Gso3g1923 518 Pfam Cytochrome P450 81 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 SUPERFAMILY Cytochrome P450 77 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 PANTHER CYTOCHROME P450-LIKE 8 513 - -
Gso3g1923 518 Gene3D Cytochrome P450 28 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1923 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1923 Gso-Chr3 44767316 44770794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1923 20 516 Cytochrome P450 AT3G14610 58.517 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1923 - K23809 gmx:100780780 1013.06