Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1913 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCATTTAATGGCAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCATTCCTTTTGTTATGTGAGGCCATCTATTTTTGAATCTCCAGCCATTACCCCATCAAACTCTGAGAGGTTTACTGTTGATTCTAGTACCCTTGATTCTGAGACGTTGAGTGGCTCATTTAGGCATGAGAGCATTGAAGAGAGGCCTGGTAAGAATGTTGCAGAAACCACGTTCAAAACGATATCAGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAACGCGTTACTTGCTAGCGGTGTTCTGGAGCCTGCAGCATCGTTTGAGGGAACCTCGTCGTTCGCTGCAATCCCTTTGCAGCCTGTTCCCCGGGGTTCTGGACCTTTGAACGGTTTCATGTCGGGACCTTTGGAGAGATTTTCTTCTGGTCCGTTGGATAAGGGCGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGTGTTATGTCGGGTCCTCTTGATGCCACTGATAAGTCCAACTTTTCAGCGCCACTTGCTCGTGGTCGTCGAAGGCCGCACCTGCAGCGCCTCATGAGAAGTGTAAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCAAGGCACTCCATGGGTGGCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGACAGGAGGTTTCTAGAAACTGTGCTGAGGTTGGATCGTCCGAATTGGAGTATAAACATACACAAAATTTGCAGTGGGCACATGGTAAGGCTGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAGGATAATCCTGTTGATCCACTTAAACCTGAAGTCCTTAAAAATGGAAATGATGTAGTTGCTCTAGAATGTGATAGGGAGGAAATGTCAGATGCTCATACCATTTCAAATGAAGAAAGTTCTTGCTGTTTAGAAAATTCTTGTACCGTAATGGTCAAGGATCAATCATCTAATAGTGAGATAGTGGAGGTAAATGCTGAAGTTAAGGTAAATATTGAACAGAGAAATTGTGGAAGTCCCAGTATTGTACATACTGATCCTGAATCTGTTCCAATTGGACAATTGAGTGGTCAAGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAGTTGTTAGAACAAGGCAAGGATTCTGTGGTTCCCAGGGAAATAGCACAAGAGAGGCAAATGAGATTCTGCTCACCTGATGGTAAAGAGGATAGATCTAGACATCCAGACGAAGGTCCCACTACTTCAGGGCAAAATGGAGGTGCTGGGTTTAATTCAACCAACCAGGTGCCGATAGCTCCTTTTTCCATTTCAGGACAAAGGCAGAATTCAAGAAAGTCATTTATTGGTACAAAAATCAGAAAAATGTACAGGAAGCAGAAGTCCTTGCGTAAGAAACTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTTTTTTCACCAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAGGAGGAATACCTGAAAATGGTGGAGAATAATATGGACAAAAATCCAGAGCTTGCCTTGATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTTATGAACCTTGGAGATAGTCGTGCAATTTTGGCTCAAGAACGGCCAAATGATCGTCATCCTAATCCGTGTCTCATCAAAGATGATATGAGGCATAGGAATCGGTCTAGAGAGTTGTTAGTGGGCATGGAGCTGGATAGAATTTCGGAAGAGTCCCCAGTGCACAATATAAACAAGCATGTTAACATGATAAACAAAAACAGAGAGATATCCGTGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGACCACAGCACAAGTATTGAAGAGGAAGTTTCTAGAATAAGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATAGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCGTCTTTTAATGAACCGCTACTGAAGATGTTTCGAGTTGATTATGTGGGAAATGCTCCTTACCTAAGTTGTGCTTCTTCTGTCCTTCATCACCGACTTTCCTCAAGTGATCGGTTCCTGGTGCTCTCGTCCGATGGGCTTTACCAATTTTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGTTCCCGAAGGTGATCCTGCACAATACCTTATCGCAGAGCTTCTCTTCCGTGCGGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTTTCTGTTATGGTGGTTTCGTTGGAGGGAAGGATTTGGAGATCATCGGGATAA 2664 0.4354 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVAETTFKTISGASVSANVSTARTGNQNALLASGVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFSSGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSRHSMGGSWVQRLFLHPVSQLAWNSKEAKFRQEVSRNCAEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKPEVLKNGNDVVALECDREEMSDAHTISNEESSCCLENSCTVMVKDQSSNSEIVEVNAEVKVNIEQRNCGSPSIVHTDPESVPIGQLSGQGRRSVRLYELLQMESWNEQLLEQGKDSVVPREIAQERQMRFCSPDGKEDRSRHPDEGPTTSGQNGGAGFNSTNQVPIAPFSISGQRQNSRKSFIGTKIRKMYRKQKSLRKKLFPWSYDWHREETFFHQKLVESSGPIRICKSGVDHNAVLRAMARALERTEEEYLKMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNPCLIKDDMRHRNRSRELLVGMELDRISEESPVHNINKHVNMINKNREISVCRLKMRAVQLSTDHSTSIEEEVSRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLKMFRVDYVGNAPYLSCASSVLHHRLSSSDRFLVLSSDGLYQFFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1913 887 MobiDBLite consensus disorder prediction 473 524 - -
Gso3g1913 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Gso3g1913 887 MobiDBLite consensus disorder prediction 476 491 - -
Gso3g1913 887 SMART PP2C_4 271 876 IPR001932 -
Gso3g1913 887 MobiDBLite consensus disorder prediction 492 524 - -
Gso3g1913 887 Gene3D - 518 884 IPR036457 -
Gso3g1913 887 Gene3D - 244 416 IPR036457 -
Gso3g1913 887 PANTHER PROTEIN PHOSPHATASE 2C 11 887 IPR015655 GO:0004722|GO:0006470
Gso3g1913 887 Coils Coil 585 605 - -
Gso3g1913 887 CDD PP2Cc 584 878 IPR001932 -
Gso3g1913 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Gso3g1913 887 Pfam Protein phosphatase 2C 600 647 IPR001932 -
Gso3g1913 887 PANTHER PROTEIN PHOSPHATASE 2C 32 11 887 - -
Gso3g1913 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1913 Gso-Chr3 44679818 44686877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1913 1 887 PP2C-type Phosphatase Gene Family AT2G46920 63.525 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1913 - - gmx:100776518 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1877 19 47489189 47496164 Gso3g1913 3 44679818 44686877 GST