Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1912 ATGGCGTCTTCATTATCTGCTCAATTGGTTCAATGTCAGAATTCACTTCCACCTCTTCAGGCTAACTTTAGCCAAGATGTGTCTAAGGTTCAAAGGTCACATGTGGTATGTTGCGGTACCAAATCACCGATTGGTTATGGTAAAACATTGACATCAAGATCACATAATGCCCTGAGGTTTTCTGTCACGCAACAATCTGAAGCAAGGTCAATTCGATATAGGAGAATGACATGTGTCAATGCTGCAGATAGTATCAAGCTGAACAGTCTTTGTACAGATGAGAAAGGATATGGTTACAAAGGAAGCTCCTTCCATCGTATAATCAAAGATTTCATGATTCAGGGTGGAGACTTTACAGAAGGAAATGGAACTGGTGGAATTAGTATCTATGGTCCTAGTTTTAAAGATGAGAGTTTTGCCTACTCTATGGCTAGACAATTGGCACGTTGTATTTGGACATATCATTGA 468 0.3974 MASSLSAQLVQCQNSLPPLQANFSQDVSKVQRSHVVCCGTKSPIGYGKTLTSRSHNALRFSVTQQSEARSIRYRRMTCVNAADSIKLNSLCTDEKGYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGPSFKDESFAYSMARQLARCIWTYH* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1912 155 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 90 138 IPR002130 GO:0000413|GO:0003755
Gso3g1912 155 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 88 140 - -
Gso3g1912 155 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 99 116 IPR020892 GO:0003755|GO:0006457
Gso3g1912 155 SUPERFAMILY Cyclophilin-like 89 142 IPR029000 -
Gso3g1912 155 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 89 155 IPR002130 GO:0000413|GO:0003755
Gso3g1912 155 Gene3D - 77 150 IPR029000 -
Gso3g1912 155 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 88 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1912 Gso-Chr3 44668433 44671544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1912 89 137 U-box Gene Family AT5G67530 61.224 2.44e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1912 K03768 - gmx:100775978 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1876 19 47475043 47477559 Gso3g1912 3 44668433 44671544 GST