Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1900 ATGGTGAACAAAACTAGTAACTCTACCTCCAAACACCAAAAACAACATGGAGAAGCAGAAAAAGATACTGTTGGAAGAACCTTGAAGATCAAGATTAAACAGTTGACAGATCAAATCAATGTCAAGAGAGGAAAATCGGTTAAAGAAAAAGTTGAAAGACATTGGAATAATCTCAAGTCTTTGTTTTCAATGGTCGAGTTAGAAATATCAAGGAGGGAGTCTTTGCAGACTAAGGAAAAAGTCAATATGCTTTCTTCAAGAATTGGCAAGCCTTTATCTAAGTTTAATGGTTTCCCTAAAGATATGATAGAGAAGGACCGCATCAACAATGCGGACTTATCATTGACAAAAACCATTAGGATTCCAAAAAAGGAAAAAATACCACCATATACATCTTGGGTATATGTGGTCAGAAATGAAAGAATGGCCAAAGATCAAACAGTTCTTGGAAAATACCAAATGTATTATGATAAAAATAGAGGTGAAATGATGATATGTAGTGATAGTGAAGAAGAGATGGTAAATCCCAAGGATGTTAAACACGACTTCACTGAGGCTGAAGACCAAATTCTATGGACCACACTTGCGGAATATGGATCTACTGAGGAGATATTTAGTATTGTTAAAGAGATTGTTAAGACAACTGATTCACAAATTCAGGAGAGGTATGAAATACTCAACAAAAAAAATATGAGGAGTCCAAGTCAGAATTTTGAAGATTGTCATTGTAGAGGATGTCAAAATCATCTTGGGATATGTTTGGAAGAAAACTTGAATGTTATTTTAGAACCTTTTGATAATTTTTTTTGTCGCCGATGTTTGATCTTTGATTGTTCTGTGCATGGCATTTATCAACCTTTAATATATCATAGTGAAAAACAATCAATTTGGTCTGAACTTGAAGGTGACAAGAAACCATGCAGCAAGCAGTGTTACATTATGTTAAAAGATGTTAATATTTTGTCAAAAAATACATCTCAAAGGTATTTTCGAGATAAAATAATTACACCAATGGAAGAGGACCCGACATTACCTCATGACGAGCCTCAAGATTCTTCTAAAAGGTTGAGAACCCCAAATGATATAATCACTGAAATTGACCTTCGTTGCATGGAACTCAATTTGGATGCTAATGATGAAGAAAACCACACAACATATGGTGCATCTTTGAAAAGTCTTAACGAACATTCTTCAGGGAAATCAACAGTTTTTTATAACTATAGCCACGATGAGCAAGGCAAAGGAGTTATGGATGGAGAAAAAGATCTCACAAATGAGATAGAATTTAACCAATTGTCCATTTCAAGGGAAGTGCAAGCTTATGAGATGACAAATGAGTCAAATTGGAGACCTCTAGAGAGAGATTTGTATTTGAAGGGGGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCTTTAACTTACTTCATGGTTTGAAGACTTGCATAGAAGTAACTAAATACATGTCTGCTTGTGACGAGACAATAACCCATGGATCCATACCAAGTTCAACCGTGGACAAAAAGGAAAAGATCAATGCAGAGTTCACAGACCAAGAAATGGCTTCAAGATCACGGTCGCAACGAAAAAAGGGCAAACCAAGAAAGTTTAATTATTCTCGAAAATCTGCTGGCCTTCCACCTAGATGGAGAAAAATTGCTTATGGGCAAAATCAATATAATAAGCAATATACTCCTTGTGGGTGTCAGGGAATGTGTGGAAAGGAATGTCCTTGTCTTCTTCATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTTTGCAACAACCGATTTAGAGGATGTCGTTGTGCTAAGAGTCAATGCAGAAGTCGACAATGCCCATGTTTTGCAGCCAACCGCGAATGTGACCCAGATGTTTGTCGAAATTGTTGGGTTAGTTGTGGCGATGGTTCATTAGGGGAGCCACCTCGATGTGGAGATGGAAAATGTGGAAATATGAATCTTCTTCTAGGGCTAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTATAGGATGGGGAGCTTTCGCAAAGAACCCGATTAACAAGAATGTGTGCCTAGGAGAATACACGGGTGAACTGATCACTCCTAAAGAAGCAGAAAAACGTGGAAAATTATATGATCGCATAAACACTTCATTCCTTTTCAACCTTAATGATCGGTGGGTTATTGATTCTTGTCGCTTGGGAGACAAGTTAAAATTTGCAAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACATCGAGTTGGCATATTTTCCAAGGAAAACATTGAAGCAGGTGAAGAGATTTTCTATGATTATTGGTATGATCTAGATTGTGCTCCACAATGGGCTCTTCCACCTGATGAGGTTTCTAAGAAAGATGAATCGATTGTTTCTCAAGGCAGGGCAAAGAAAAACCAATCTCATTGTTGA 2445 0.3718 MVNKTSNSTSKHQKQHGEAEKDTVGRTLKIKIKQLTDQINVKRGKSVKEKVERHWNNLKSLFSMVELEISRRESLQTKEKVNMLSSRIGKPLSKFNGFPKDMIEKDRINNADLSLTKTIRIPKKEKIPPYTSWVYVVRNERMAKDQTVLGKYQMYYDKNRGEMMICSDSEEEMVNPKDVKHDFTEAEDQILWTTLAEYGSTEEIFSIVKEIVKTTDSQIQERYEILNKKNMRSPSQNFEDCHCRGCQNHLGICLEENLNVILEPFDNFFCRRCLIFDCSVHGIYQPLIYHSEKQSIWSELEGDKKPCSKQCYIMLKDVNILSKNTSQRYFRDKIITPMEEDPTLPHDEPQDSSKRLRTPNDIITEIDLRCMELNLDANDEENHTTYGASLKSLNEHSSGKSTVFYNYSHDEQGKGVMDGEKDLTNEIEFNQLSISREVQAYEMTNESNWRPLERDLYLKGVEMFGKNSCLIAFNLLHGLKTCIEVTKYMSACDETITHGSIPSSTVDKKEKINAEFTDQEMASRSRSQRKKGKPRKFNYSRKSAGLPPRWRKIAYGQNQYNKQYTPCGCQGMCGKECPCLLHGTCCEKYCGCSKLCNNRFRGCRCAKSQCRSRQCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRCGDGKCGNMNLLLGLKERILLAKSDVIGWGAFAKNPINKNVCLGEYTGELITPKEAEKRGKLYDRINTSFLFNLNDRWVIDSCRLGDKLKFANHSSKPNCYAKVMLVGGEHRVGIFSKENIEAGEEIFYDYWYDLDCAPQWALPPDEVSKKDESIVSQGRAKKNQSHC* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1900 814 MobiDBLite consensus disorder prediction 1 25 - -
Gso3g1900 814 MobiDBLite consensus disorder prediction 335 357 - -
Gso3g1900 814 SUPERFAMILY Homeodomain-like 168 237 IPR009057 -
Gso3g1900 814 ProSiteProfiles CXC domain profile. 550 649 IPR026489 -
Gso3g1900 814 MobiDBLite consensus disorder prediction 515 542 - -
Gso3g1900 814 Gene3D SET domain 564 779 IPR046341 -
Gso3g1900 814 ProSiteProfiles SET domain profile. 663 778 IPR001214 GO:0005515
Gso3g1900 814 CDD SET_EZH 663 779 - -
Gso3g1900 814 Pfam SET domain 674 777 IPR001214 GO:0005515
Gso3g1900 814 SMART CXC_2 598 635 IPR033467 -
Gso3g1900 814 SMART set_7 663 784 IPR001214 GO:0005515
Gso3g1900 814 MobiDBLite consensus disorder prediction 11 25 - -
Gso3g1900 814 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 15 811 IPR045318 GO:0006338|GO:0018024
Gso3g1900 814 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 15 811 - -
Gso3g1900 814 SUPERFAMILY SET domain 537 781 IPR046341 -
Gso3g1900 814 Pfam CXC domain 602 633 IPR041355 -
Gso3g1900 814 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 814 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1900 Gso-Chr3 44528852 44538126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1900 652 777 C2H2 Transcription Factor Family AT2G23740 28.671 1.08e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso3g1900 SET 4.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1900 - K11430 gmx:106798111 1697.18