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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso3g1895
ATGTCAGGAAAGATCATTATCTCGGCTGTTTCTCTCATCCTGGTGGTGGGTGTGGCAATCGGCGTGGTGGTCGCCGTGAACAAGAAGGGCGAGGATCCTGCAGTTGAATCCCACCAAAAATACGTAGGGGTCATATGCCAAAACACCGATGAGAAAAAGCTCTGCCATGACACCCTGAGCTCCGTGAAGGGCATGGACAGCGCTGACCCCAAGGCCTACATCGCCACCGCTGTGAAAGCCACCATGGACAGCGTGACCAGGGCCTTCAACATGAGCGACAGGCTCACCACAGAGTACGGTGGCAGCGATAACGGAACCAAGATGGCCCTTGACGACTGCAAGGACCTCTTGCAATCAGCCATCGAGAGCCTCCAGCTCAGCACTGACATGGTTCACAACAACAACGTCCAGGCCGTGCATAACCAACAGGCTGATTTCAAGAACTGGCTCAGCGCTGTCATCTCTTACCAACAGGCCTGCACGGAGGGTTTTGACGATGCCAAAGACGGTGAGAAGAAGATCAAGGAGCAGTTGCAGACCCAGACCTTGGACAATGTTCAGAAACTCACTGGCATCACCCTTGACATTGTGAGTTCTTTGTCCCACATCCTCGAGCAGTTCGGCTTAAAGTTTAATCTTAAACCCGCATCTCGTCGTCTTCTCAGCGAGGATGGGTTCCCCACTTGGTTCTCTGCTGGTGATCGCAAGCTCTTGGCTCGTGGATGGAGAGCACGTATCAAGCCCAATGTTGTGGTTGCCAAGGATGGCTCTGGTCAGTTCAATACCGTTGCTCAGGCTATTGCTTCATACCCTAAGAATAACCAGGGTAGGTACATTATCTACGTTAAGGCCGGTGTCTATGACGAGTACATCACCGTTCCCAAGACTGCAGTCAACATTCTCATGTACGGTGATGGCCCTGCTAAGACCATCATCACCGGTCGCAAGAACTACGTCGAAGGTGTCAAGACCATGCAAACTGCCACTTTCGCCAACACTGCCGAAGGCTTCATTGCCAAGGCAATGACATTCCAGAACACAGCCGGTGCTGAGGGCCACCAAGCCGTTGCATTCAGGAACCAAGGAGACAGATCAGCTCTGGTTGGTTGCCACATTTTGGGGTACCAAGACACCTTGTACGTCCAGACCAACAGGCAATTCTACCGCAACTGCGTGATCTCTGGCACAGTGGACTTCATCTTTGGCACCTCCCCCACCGTGATCCAGCACTCAGTGATCATCGTGAGGAAGCCCTTGGACAACCAGTTCAACACGATCACCGCCGACGGAACATCCATGAAGAACATGGATACAGGAATCGTGATCCAGGGTTGCAACATCATCCCAGAAGCCGAACTCTTCCCTACAAGATTCCAGGTGAAGTCATACCTTGGAAGGCCATGGAAGCAATTCTCAAGGACAATTGTGATGGAATCCACCGTGGGTGACTTCCTTCACCCGGAAGGATGGTGCCCATGGGCCGGTGAACACTTCGAAGACACCCTGTACTATGCTGAATACAACAACGATGGACCTGGTGCCAACGTTAACGGAAGGATCAAGTGGAAGGGTTACCGCGGTCTCATTAGCCAGCAAGAAGCTGCTCAGTTCACCCCTGCCCAATTCCTCCAGGCTGGTTCCAACGGTGGAACTGACTGGTTGAAGGCTCTCCATGTTCCTCATGCACTTAACTTCTTGAAAGCTTGA
1707
0.5237
MSGKIIISAVSLILVVGVAIGVVVAVNKKGEDPAVESHQKYVGVICQNTDEKKLCHDTLSSVKGMDSADPKAYIATAVKATMDSVTRAFNMSDRLTTEYGGSDNGTKMALDDCKDLLQSAIESLQLSTDMVHNNNVQAVHNQQADFKNWLSAVISYQQACTEGFDDAKDGEKKIKEQLQTQTLDNVQKLTGITLDIVSSLSHILEQFGLKFNLKPASRRLLSEDGFPTWFSAGDRKLLARGWRARIKPNVVVAKDGSGQFNTVAQAIASYPKNNQGRYIIYVKAGVYDEYITVPKTAVNILMYGDGPAKTIITGRKNYVEGVKTMQTATFANTAEGFIAKAMTFQNTAGAEGHQAVAFRNQGDRSALVGCHILGYQDTLYVQTNRQFYRNCVISGTVDFIFGTSPTVIQHSVIIVRKPLDNQFNTITADGTSMKNMDTGIVIQGCNIIPEAELFPTRFQVKSYLGRPWKQFSRTIVMESTVGDFLHPEGWCPWAGEHFEDTLYYAEYNNDGPGANVNGRIKWKGYRGLISQQEAAQFTPAQFLQAGSNGGTDWLKALHVPHALNFLKA*
569
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso3g1895
568
ProSitePatterns
Pectinesterase signature 1.
274
293
IPR018040
-
Gso3g1895
568
ProSitePatterns
Pectinesterase signature 2.
393
402
IPR033131
-
Gso3g1895
568
Pfam
Pectinesterase
249
545
IPR000070
GO:0030599|GO:0042545
Gso3g1895
568
CDD
PMEI-like_3
45
201
-
-
Gso3g1895
568
Pfam
Plant invertase/pectin methylesterase inhibitor
45
196
IPR006501
GO:0004857
Gso3g1895
568
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
40
201
IPR035513
-
Gso3g1895
568
SUPERFAMILY
Pectin lyase-like
246
556
IPR011050
-
Gso3g1895
568
PANTHER
PECTINESTERASE
3
564
-
-
Gso3g1895
568
PANTHER
PECTINESTERASE
3
564
-
-
Gso3g1895
568
Gene3D
-
243
564
IPR012334
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso3g1895
Gso-Chr3
44481882
44483936
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso3g1895
1
560
Carbohydrate Esterase
AT2G47030
40.932
2.57e-139
414
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso3g1895
K01051
-
gmx:100815015
1112.44
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso3g1895
3
44481882
44483936
Gso2g0073
2
836645
838987
PCT
Gso3g1895
3
44481882
44483936
Gso10g1267
10
38520507
38523576
PCT
Gso10g1268
10
38527050
38529298
Gso3g1895
3
44481882
44483936
PCT
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