Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1860 ATGGAAATTGACCAATTTTCTTCCACAGATTTAAATTTCAAAGGAGTCCAGGTGGGTTATGGTTCTACACAAGAGGATGTGTTCCAAGGGAAAGAGAGATTCTCTGGAATGGAATTTCTGGGAGAGATTGATCCTCTTCCTACTGAGGATGGAAAAGGAGCCAAATTGTTCAATGATCAAGATCAGAAACAGCTACAAGAACCCAAAATTGATAACTTCATGTTAGAAGAGGTTAACTTTAACCCTGATATGCAAATGCAACCAACACAACTATTTCAGGAAACCACAGGACTAATGAAACATGTTAGGGTAAATTCAGAACTAGTTGAATACAATAAGCAGGTGCCACCAACACCATCATTAGCATCCTTAGAGCTCCTGAGAAATTACGGAAGCAGGTTCAAGAGGCTAAGCGAGCAAAACATAAGCACCTTAAGCAATATTGAAACTTCCTTTGATCGCCAGAAGATGTCAACTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATCTCCAATATTCTGCACATTGGAATGATAGTTTTTACATCCCTATGCATCCATACGGGTTAGATCTAGTTGGTTTCTCTGAGGAGGAAAACAGAGACATAGAACTTGCTCAATTTCTCCTTGCTGCAGCCGAGAGGGTAGGTTGCCAACAATTTGAACGTGCAAACGGGTTACTTCTCCATTGTGAATGGAGTTCATCTGGCAGTGCAAGCCCTGTTCAAAGAGTTATCTTTCATTTCGCTCGAGCACTTCGAGAGAGAATATACAAAGAAACAGGAAGGATGACAGTTAAGGGATCAGGGAAAAATGAAGAAAGGGAGTTAATTCAGAAGATGGACACTAACATTTCCATTAAATGCCATCTAAAAATTCCTTTCAATCAAGTAATGCAATTCGCTGGGGTACAAGCTATAGTGGAACATGTAGCATCTGAGACCAAAATCCATCTTATAGATCTTGAAATAAGAATTGGTGTGCAATGCACAGCTTTGATGCAAGCACTGTCTGAACGCCGGGATTGCGTAGTGCAACTTTTGAAGATAACTGCCATTGGACTTAACTCATTGAAAATCATGATAGAAGAGACTGGCAAAAGTTTAACTAGTTTTGCTGAATCCTTGAACTTACCCTTTTCATATAATGCAGTTTTTGTGGCCGACATTGCCGAAATAAGGAAAGATCATTTCGAAATTGGAGAGGATGAAGCTGTGGCTGTTTACTCTCCATATTTTCTAAGGAGCATGGTATCAAGGCCTGATTGCATGGAGAACTTGATGAGGATTATAAGAAATATCAAACCAGTTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCACCCTCCTTGGTGAACCGTTTCATTGAAGCATTGTTCTTCTACTCAGCATATTTTGATTGCCTTGAAACATGCATAAAACATGAGATTGAGTGCAAAATGACAATAGAAGCAGTATTATCTGAAGGGATAAGAGACATTGTTGCTATGGAAGGAAGGGAAAGGACTGTCAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAAACCGGGTTTAGTGAGTCATCTCTGTACCATGCTCACTTGGTTGCCAAAGAGTTTGCTTTTGGGAAATTCTGCACTATAGAAAAAAATGGTAAGGGTCTTGTAGTTGGATGGAAGGGGACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1731 0.398 MEIDQFSSTDLNFKGVQVGYGSTQEDVFQGKERFSGMEFLGEIDPLPTEDGKGAKLFNDQDQKQLQEPKIDNFMLEEVNFNPDMQMQPTQLFQETTGLMKHVRVNSELVEYNKQVPPTPSLASLELLRNYGSRFKRLSEQNISTLSNIETSFDRQKMSTEEIIRVAGARYLQYSAHWNDSFYIPMHPYGLDLVGFSEEENRDIELAQFLLAAAERVGCQQFERANGLLLHCEWSSSGSASPVQRVIFHFARALRERIYKETGRMTVKGSGKNEERELIQKMDTNISIKCHLKIPFNQVMQFAGVQAIVEHVASETKIHLIDLEIRIGVQCTALMQALSERRDCVVQLLKITAIGLNSLKIMIEETGKSLTSFAESLNLPFSYNAVFVADIAEIRKDHFEIGEDEAVAVYSPYFLRSMVSRPDCMENLMRIIRNIKPVIMIVLEVEANHNSPSLVNRFIEALFFYSAYFDCLETCIKHEIECKMTIEAVLSEGIRDIVAMEGRERTVRNVKIDVWRRFFARYRMVETGFSESSLYHAHLVAKEFAFGKFCTIEKNGKGLVVGWKGTPMHSISAWRFL* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1860 576 ProSiteProfiles GRAS family profile. 196 574 IPR005202 -
Gso3g1860 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 574 IPR005202 -
Gso3g1860 576 Pfam GRAS domain family 206 574 IPR005202 -
Gso3g1860 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 58 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1860 Gso-Chr3 44189288 44193606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1860 199 575 GRAS Transcription Factor Family AT5G17490 29.765 9.30e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso3g1860 GRAS 2.7e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1860 - - gmx:100791952 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1824 19 46972515 46974954 Gso3g1860 3 44189288 44193606 GST