Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1829 ATGTTGGGCACCGTCGAGTCAAACGGTGCCGTTTGTTATTATTCAGAGCTTGGGATTGTCAAACATTGCACCGACGACGAAATTCGATGCGCTTATCGTAAGATGGCTCTGAAGTGGCATCCTGATAGGTGGATCAAGGACCCTAAGCTTGCACTAGAAGCTAAAAACCGATTCCTGCGCGTACAAGAGGCTTATTCAGTTTTGTCTAATAAAGGGAAGAGAAGGATATATGATGCTGGCTTGTTTGGTCTGATCGGAGAGGATGATGATGAGGGATTTCTTGATTTCATGCAAGAAATGGCCTTGATGATGCAGAAAGTGAGACCCAAGGATGAGAAAGGCATGTTGGAGGATCTTCAAGGATTGTTAATCGATAAGATGGCAGATAATGAAGGGATGGAAAAGTCTGGGTTAAGCTGGAATTCATCTCCATGTCCTACAAAAAGGGCACGTATCTTATGA 462 0.4394 MLGTVESNGAVCYYSELGIVKHCTDDEIRCAYRKMALKWHPDRWIKDPKLALEAKNRFLRVQEAYSVLSNKGKRRIYDAGLFGLIGEDDDEGFLDFMQEMALMMQKVRPKDEKGMLEDLQGLLIDKMADNEGMEKSGLSWNSSPCPTKRARIL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1829 153 Gene3D DnaJ domain 4 91 IPR036869 -
Gso3g1829 153 SMART dnaj_3 11 73 IPR001623 -
Gso3g1829 153 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 152 - -
Gso3g1829 153 PANTHER PUTATIVE, EXPRESSED-RELATED 5 152 - -
Gso3g1829 153 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Gso3g1829 153 CDD DnaJ 12 70 IPR001623 -
Gso3g1829 153 Pfam DnaJ domain 13 78 IPR001623 -
Gso3g1829 153 PRINTS DnaJ domain signature 14 32 IPR001623 -
Gso3g1829 153 PRINTS DnaJ domain signature 32 47 IPR001623 -
Gso3g1829 153 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gso3g1829 153 SUPERFAMILY Chaperone J-domain 10 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1829 Gso-Chr3 43929153 43930797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1829 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 2.06e-11 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1796 19 46698669 46700272 Gso3g1829 3 43929153 43930797 GST