Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1815 ATGGGAATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACCAAACGTACAGCCCCCAAATCCAATGATATTTACCTCAAGCTCCTCGTCAAGCTGTACCGTTTTCTTGTTCGGAGGACTGGTAGTAACTTCAATGCCGTCATCCTCAAACGCCTTTTCATGAGCAAGGTCAACAAGCCCCCGCTATCCCTCTCTAGATTGATTCGTTACACCAAGGGAAAGGAGGATAAGATAGCTGTGGTAGTCGGGGCCGTGACCGATGACATTAGGGTGTATGAAGTCCCTGCTCTGAAGGTAACTGCCCTGAGGTTCACTGAAACTGCCAGAGCTAGAATTGAGAAGGCTGGTGGCGAATGCCTCACCTTTGATCAACTGGCTCTTAGAGCTCCACTCGGCCAGAATACGGTTCTTCTTAGAGGTCCCAAGAATGCCCGTGAGGCTGTCAAGCACTTTGGACCAGCTCCTGGTGTGCCCCATAGCCACACCAAGCCCTATGTCCGTGCAAAGGGAAGGAAATTTGAGCGGGCTAGAGGAAAAAGGAATAGCAGAGGCTTTAGAGTTTGA 564 0.5018 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYTKGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1815 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Gso3g1815 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Gso3g1815 187 Gene3D - 1 187 - -
Gso3g1815 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gso3g1815 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1815 Gso-Chr3 43827123 43829023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1815 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 79.032 5.74e-104 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1815 K02883 - gmx:100499789 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1778 19 46571443 46573472 Gso3g1815 3 43827123 43829023 GST