Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1804 ATGAGAGCTGGTGAGTTTTTCCACTCAGCTCAAAGCCGAGCCTTAGAGCAGCGGAGAGAACATGAATCATGCCACCTGAGTGGGGAATCTATAGAAACACCTTTATTACAGGACCAAGAATTGTCTGTTGATTCATCAAAGCAAGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGTATTTGATAGAATTTTATTTTGTGCTACTAGAGGAAATGTATTTTTGAGGCAGGCGACTGTTGAGGATCCCGTCACAGACCCTGTTTCTAGAGAAAAGATGTTCACCTGCAGACTGAGAAAAAAGTTTTTGTGGTCTTCTATGCTGGTGAAAAAGAAAAAGCCAAGATTCTTAGATGTCTCCTGTAACCATAAGGCATAG 393 0.4173 MRAGEFFHSAQSRALEQRREHESCHLSGESIETPLLQDQELSVDSSKQVKLGFLAGLVPREKSMVFDRILFCATRGNVFLRQATVEDPVTDPVSREKMFTCRLRKKFLWSSMLVKKKKPRFLDVSCNHKA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1804 130 Pfam V-type ATPase 116kDa subunit family 3 98 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso3g1804 130 PANTHER VACUOLAR PROTON ATPASES 2 98 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso3g1804 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 2 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1804 Gso-Chr3 43746887 43750542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1804 2 97 Primary Pumps ATPases(2) AT4G39080 63.542 2.90e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1804 K02154 - gmx:102663147 255.373