Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1761 ATGAGAGACATGGACTCTCCAGAGAAAAAACAAGGCCTTCCCTCTAATGAAGGCGTGCAGGATATTTTGTACACTGAACTGTGGCGTGCATGTGCTGGGTCATTCGTTTATGTTCCTCGCGTTGATGACAGGGTTTTCTACTTCCCTCAAGGCCACTTGGAGCAGGTTGCTGCATATACTCAGAATCAGCCAGATAGTCACCTGGAAATTCCTGTGTATGATTTGCCTTCGAAGATCTTATGCAAGATTATGAATGTTGAATTAAAGGCCGAAGCTTACTCAGACGAGGTTTATGCTCAAGTTACATTAGTTCCGGAGGTCCAGAAAGATAACCTTTGTTTTGAGGAGGAGGTAAACATAGATCAGATACCTTCCAGAAATGCAGCTTATTCTTTTAGTAAGATACTGACTCCGTCAGACACAAGTACACATGGTGGATTCTCTGTTCCGAAGAAATATGCTGATGAATGCTTCCCTCCGCTGGACATGACTCTTCAAACACCAGCGCAGGAAATTGTTGCAAAGGACTTGAATGGATTTGAGTGGCGTTTTCGTCACATATATCGTGGTCAGCCCAAACGACACTTGCTTACTAGCGGTTGGAGCTTATTCGTGAATGCAAAGAAACTTGTTGCTGGAGATTCATGCATTTTCGTTAGAGGGGAATCTGGAGAACTTCGTGTTGGGATTCGTCGGGCAGCAGAAAATCTCAGCAATATATCGCAATCTTCATCTCTGATATCGGGTCATAGCATGCAACTTGGAATTTTGACTAATGCTTCCAATGCTGTTGGCAACAGAACCATGTTTCTTGTCTATTACCGCCCGTGGACAAATCCCTTTGAATTTATTGTCCATCTCCAAACCTATTTGAAGTCAACTTTACAAGACTATCCAATTGGAACGAGGGTACAAATGCAGCATGAAGTTGAAGAATCTTTAAGAAGACTTGCAGGTACGATAATTGGTAATGAAGATATCGATAGTATTAGGTGGCCTGGTTCTGCATGGAGACGTCTCAAGGTGCAATGGGACGCCATAGTAGAAGACAAAATGCATCCTGAAAGGGTTTGTCCTTGGTGGATTGAGCCCTTGGAATCTGCCAAGGAGAAGAAGCAAGTTCCTGCTCTCCCCACCAAGAAAAAGGGGCATGCACTTCTTAACCAGCGCTCTTTGCCTGGAATAAGTGGCTTTGGCAAGAATGATGTTCATCAGAATTCAGCTGGCCCTTCGTCTCAGACTCGGAGGGCAGATGGAGACCTGCAAGGTCAAGATTACAGCGGCCTATCTCCTCCACAGCCTTTGCAAAGAGCACCATCAACTGATATAATCCGCCCATCAAAGGTCCCAATCCGTGGCTCGCGGTTCGGGAAGGAGAATCGGAATCAGCATCCCTTTCTCAAGCAAGATCCTCTTCATAAATCTCTTGGCAGATCAATGTCACTTACACATGAAGACTTGTCAATTACAAGCTCAAACCTAACTTCCATTGGTTCTGAATCCCTTGGAATGCCTTCTACTGAATCTAGAGATGAAAATGATGCTCCTTTTGGGCAGCCTGGCAGTTCTAGTACATTCAAACTTTTTGGAGTTAACTTAATTGACAGCTCCCCTGAGATCCCATCGGTTAATTTTGTTGATCTCAACAAGACTTCAAGTCTTCCTTCTAGTCCTCCAATGGGTGTTGCCCCAGGAAAAACATGCAAGAAGTGTCGCTGTGTTAATAATCGGAGCTGCACAAAGGTGCTTAAGCTGGGAAATGCTCTTGGAAGAGCAGTTGACCTTGCACGCTTTAATGGGTATACCGAACTTATTGCTGAATTGGACTCCATGTTCGATTTTCAAGGAACCTTGATAAGCGGAGGTAGTGGGTGGCACGTTACCTGCTTGGATGATGAAGGAGATATGATGCAACTTGGAGATTATCCCTGGCAGGATTTCCTGGGCGTGGTGCAAAAGATGATCATATGTCCAAAGGAAGGTACTGACAATCTCAAGCCAGGCTCCTCAGCTAATCCTTGA 2022 0.4476 MRDMDSPEKKQGLPSNEGVQDILYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVYDLPSKILCKIMNVELKAEAYSDEVYAQVTLVPEVQKDNLCFEEEVNIDQIPSRNAAYSFSKILTPSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLLTSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGILTNASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEESLRRLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQVPALPTKKKGHALLNQRSLPGISGFGKNDVHQNSAGPSSQTRRADGDLQGQDYSGLSPPQPLQRAPSTDIIRPSKVPIRGSRFGKENRNQHPFLKQDPLHKSLGRSMSLTHEDLSITSSNLTSIGSESLGMPSTESRDENDAPFGQPGSSSTFKLFGVNLIDSSPEIPSVNFVDLNKTSSLPSSPPMGVAPGKTCKKCRCVNNRSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLISGGSGWHVTCLDDEGDMMQLGDYPWQDFLGVVQKMIICPKEGTDNLKPGSSANP* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1761 673 Gene3D - 130 234 IPR015300 -
Gso3g1761 673 MobiDBLite consensus disorder prediction 400 437 - -
Gso3g1761 673 SMART B3_2 132 234 IPR003340 GO:0003677
Gso3g1761 673 ProSiteProfiles PB1 domain profile. 577 659 IPR000270 GO:0005515
Gso3g1761 673 Pfam B3 DNA binding domain 132 233 IPR003340 GO:0003677
Gso3g1761 673 MobiDBLite consensus disorder prediction 491 521 - -
Gso3g1761 673 MobiDBLite consensus disorder prediction 452 468 - -
Gso3g1761 673 Gene3D - 298 371 - -
Gso3g1761 673 CDD B3_DNA 131 232 IPR003340 GO:0003677
Gso3g1761 673 PANTHER AUXIN RESPONSE FACTOR 13 669 - -
Gso3g1761 673 Pfam Auxin response factor 260 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gso3g1761 673 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 669 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gso3g1761 673 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
Gso3g1761 673 Gene3D - 573 666 - -
Gso3g1761 673 MobiDBLite consensus disorder prediction 390 474 - -
Gso3g1761 673 SUPERFAMILY DNA-binding pseudobarrel domain 119 256 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1761 Gso-Chr3 43412627 43423569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1761 21 669 B3 DNA Binding Superfamily AT4G23980 38.336 7.94e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gso3g1761 B3 1.2e-23 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1761 - - gmx:100776512 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1728 19 46158868 46170347 Gso3g1761 3 43412627 43423569 GST