Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1755 ATGAAGATGAGATTTTTTCTTGTAGCTTGTTTGGCAGTGTTCTGCATCCTAGGGGTTTGCCAAGGAGGCAACCTCAGAAAGAAATTCTACAAGAAAACATGTCCTCAAGCTGAGGAGATTGTTAGGACGAAAATCCAGGAACATGTCTCTGCAAGGCCTGATTTGCCTGCCAAGTTGATTAGAATGCATTTTCATGATTGTTTTGTCAGGGGTTGTGATGGTTCAGTTTTGCTGGACTCCACTGCCACCAACACTGCAGAGAAGGACTCCATTCCCAACTTATCTTTGGCTGGCTTTGATGTCATAGATGACATTAAAGAAGCATTGGAGGCTAAATGTCCCGGAACTGTGTCTTGTGCTGATATATTAGCATTGGCAGCTAGGGATACTGTTTCTGTCAAATTTAATAAGCCAACATGGGAAGTACTTACCGGTAGAAGAGATGGCACAGTATCCATAAGTGGTGAAGCCTTAGCTAATCTGCCAGCACCTTTCTTCAACTTCACCCAGCTCAAAGAAAGCTTTGCTAGCAAAGGGCTTACTGTGCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGGATAGGTCACTGCAACTTATTCAGTAACAGGCTTTTCAATTTCACCGGAAAAGGTGATCAAGATCCTTCATTGAATCCTACTTATGCCAATTTCTTGAAGACAAAATGCCAAGGTCTCAGTGACACCACCACAACAGTAGAGATGGATCCTAACAGCTCAAACACCTTTGACAGTGACTATTATTCTATCCTTCGCCAGAATAAGGGTCTATTCCAATCAGATGCTGCTCTTTTAACAACTAAGATATCAAGAAACATTGTCAACGAATTGGTTAATCAAAACAAGTTCTTCACAGAGTTTGGACAGTCAATGAAGAGAATGGGAGCCATTGAGGTCCTCACTGGCTCTGCTGGGGAAATTAGGAAGAAGTGCTCTGTTGTCAACTCTCATAGAAGTGTCACTGAGGGATTAAACATGAAGATAAGATTTTTTCTTGTAGCTTGTTTGGCAGTGTTCTGTGTCTTAGGGGTTTGTCAAGGAGGCAACCTCAGAAAGAAATTCTACAGGAAATCCTGTCCTCAAGCCGAGCAGATTGTTAGGACCAAAATCCAGCAACATGTCTCTGCATGCCCCAATTTGCCTGCCAAGTTGATTAGATTGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGCTCAGTTTTGCTGGACTCCACTGCCACCAACATTGCAGAGAAGGATGCCATTCCCAATTTATCTTTGGCTGGCTTTGATGTCATAGATGACATTAAAGAAGCATTGGAGGCTAAATGTCCCGGAATTGTATCTTGTGCTGACATACTAGCTTTGGCAGCTAGGGATTCTGTTTCTGCAGTCAAACCTGCGTGGGAAGTGCTTACCGGTAGAAGAGATGGCACAGTATCCGTAAGTGGTGAAGCCTTGGCCAATCTGCCGGCACCTTTCTACAATTTCACCACGCTCAAAGCAAGCTTTGCTAGTAAAAATCTTAATGTGCACGACCTGGTTGTATTATCAGGAGCTCACACAATTGGGATAGGTCACTGTAACTTATTCAGTAAAAGGCTTTTCAACTTCACCGGAAAAGGTGATCAAGATCCTTCTTTGAACCCTACTTATGCCAATTTCTTGAAGACAAAATGCCAAGGTCTCAGTGACAACACTACAACAGTAAAGATGGATCCTAACAGCTCAAACACCTTTGACAGTAACTATTATTCTATCCTTCGCCAGAACAAGGGTCTATTCCAATCAGATGCTGCCCTTTTAACAACAAAGATGTCAAGAAACATTGTCAACAAATTGGTCAAAAAAGACAAGTTCTTCACAAAGTTTGGGCATTCAATGAAGAGAATGGGAGCAATTGAGGTTCTCACAGGCTCCGCTGGGGAAATTAGGAGGAAGTGCTCTGTTGTCAACGCTTAA 1968 0.4263 MKMRFFLVACLAVFCILGVCQGGNLRKKFYKKTCPQAEEIVRTKIQEHVSARPDLPAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDSIPNLSLAGFDVIDDIKEALEAKCPGTVSCADILALAARDTVSVKFNKPTWEVLTGRRDGTVSISGEALANLPAPFFNFTQLKESFASKGLTVHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTVEMDPNSSNTFDSDYYSILRQNKGLFQSDAALLTTKISRNIVNELVNQNKFFTEFGQSMKRMGAIEVLTGSAGEIRKKCSVVNSHRSVTEGLNMKIRFFLVACLAVFCVLGVCQGGNLRKKFYRKSCPQAEQIVRTKIQQHVSACPNLPAKLIRLHFHDCFVRGCDGSVLLDSTATNIAEKDAIPNLSLAGFDVIDDIKEALEAKCPGIVSCADILALAARDSVSAVKPAWEVLTGRRDGTVSVSGEALANLPAPFYNFTTLKASFASKNLNVHDLVVLSGAHTIGIGHCNLFSKRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDNTTTVKMDPNSSNTFDSNYYSILRQNKGLFQSDAALLTTKMSRNIVNKLVKKDKFFTKFGHSMKRMGAIEVLTGSAGEIRRKCSVVNA* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1755 655 CDD secretory_peroxidase 357 653 IPR033905 GO:0004601|GO:0042744
Gso3g1755 655 Gene3D - 361 654 - -
Gso3g1755 655 Gene3D - 28 323 - -
Gso3g1755 655 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 Gene3D Peroxidase, domain 2 493 633 - -
Gso3g1755 655 Gene3D Peroxidase, domain 2 162 302 - -
Gso3g1755 655 PANTHER PEROXIDASE 4 322 - -
Gso3g1755 655 PANTHER PEROXIDASE 337 653 - -
Gso3g1755 655 ProSiteProfiles Plant heme peroxidase family profile. 357 654 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 ProSitePatterns Peroxidases proximal heme-ligand signature. 515 525 IPR019793 -
Gso3g1755 655 SUPERFAMILY Heme-dependent peroxidases 358 654 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 Pfam Peroxidase 374 617 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Gso3g1755 655 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PRINTS Haem peroxidase superfamily signature 575 590 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PANTHER PEROXIDASE 25-RELATED 337 653 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 PANTHER PEROXIDASE 25-RELATED 4 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g1755 655 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1755 Gso-Chr3 43364262 43371549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1755 334 655 Peroxidase AT1G05260 53.067 1.16e-114 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1755 - K00430 gsj:114405310 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1755 3 43364262 43371549 Gso2g1257 2 15605110 15607010 PCT
Gso3g1755 3 43364262 43371549 Gso10g0196 10 2041459 2043427 PCT
Gso2g1257 2 15605110 15607010 Gso3g1755 3 43364262 43371549 PCT
Gso10g0196 10 2041459 2043427 Gso3g1755 3 43364262 43371549 PCT