Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1723 ATGATGGGAAACAATTGTGTCGGATCAAAAACCTCAAATGATGCACTATTTCCCTATGTTCTTCCGGGTTCATTCTGGTGGCTTCATCAAACTAGTGTCACAGAAATTTCTGATGCACCTTCACTCGTGACTAAAATTCAAGACACAAATTTTCTAGAGAATGTTCAAGAAAACCCACCACAAGTAGTGAAAATTAACCACGAGGAGATGAAGCTGAAACCAACAGTTCCAAAACATGACAAAGAGACTAATATGCCTTCAGAGGAACAAACAAGGCACATGCAGAAAATGCCTCACAAAGTTAAGAGGCTACCAATAGGGCTTCAAGCAGAGTCAATTTTGAAGAGAAAAAATGGTAACTTTAAGGAGTACTATAACTTGGGACAAGAGCTTGGGAAGGGTCAATATGGAACAACATTCCTATGTACCGAGAAAGCCACAGGGAAAAACTATGCATGCAAGTCCATTCCAAAAGTGAAATTGGTTATGGATGATGATGTGGAGGATGTGAGGAGGGAGATTGAGATAATGCATCACTTAAAAGGGTGTCCTAATGTGATATCAATCAAAGGGGCTTATGAGGATGGTGTTGCCGTTTATGTTGTGATGGAATTGTGTGAAGGGGGTGAACTGTTTGATAGGATTGTGGAAAAGGGGCATTACACAGAGAGAAAAGCAGCAAAACTTGCAAGGACTATCGTTAGTGTTATAGAGGGGTGTCACTCCCTTGGAGTGATGCATCGGGATCTTAAGCCTGAGAATTTTCTTTTCGTTGATGGGAATGAAGAGTCCACCCTTAAGGCGATAGATTTTGGATTGTCTGTTTTCTTCAAACCAGGAGAAGTTTTTAAGGACGTGGTTGGAAGTCCTTATTATATCGCACCTGAAGTTCTACGTAGGCATTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGCGGAACACCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAAGAAGTTTTGCATGGTGATCTTGATTTCTCTTCAGATCCTTGGTTTGATATCTCTGAAAGTGCTAAAGACTTGGTTAGGAAAATGCTTGTTAGAGATCCTAGAAAACGGATAACAACACATGAAGTTCTTCGTCACCCTTGGATTCAGGTTGATGGAGTTGCTCCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTCTGTAACAAACAAACTAAAAAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGAAGAAATCTATGAATTGAAAGTAATGTTTAAGATGATAGACACGGACAACAGTGGTCAAATTACTTTAGAAAAACTCAAGGCTGGATTGAAAATGCTTGGTGCAAATCTCAGTGAACCAGAAATTTTGGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGAGAAGATCATTTAGTTGCAGCTTTTTCATTTTTTGATAGAAGTGGAAGTGGCTACATCACTCAAGATGAGCTTCAAGAAGCTTGCGAAGAATTTGGCATTGGGAATGTCTGCTTGGAGGAAATGATCCAAGAAGCTGATCGGAATAATGATGGCCGAATAGACTACAATGAATTCGTGGCTATGATGCAGAGAGGCAATGCAGATTTAAGTAAAAACGGTTTAAAGGGTGGCACTGATTTTAGTATTGGATTTAGGGAGGTACTATCAGTGTGTTGA 1773 0.4005 MMGNNCVGSKTSNDALFPYVLPGSFWWLHQTSVTEISDAPSLVTKIQDTNFLENVQENPPQVVKINHEEMKLKPTVPKHDKETNMPSEEQTRHMQKMPHKVKRLPIGLQAESILKRKNGNFKEYYNLGQELGKGQYGTTFLCTEKATGKNYACKSIPKVKLVMDDDVEDVRREIEIMHHLKGCPNVISIKGAYEDGVAVYVVMELCEGGELFDRIVEKGHYTERKAAKLARTIVSVIEGCHSLGVMHRDLKPENFLFVDGNEESTLKAIDFGLSVFFKPGEVFKDVVGSPYYIAPEVLRRHYGPEADVWSAGVIIYILLCGTPPFWGESEQEIFEEVLHGDLDFSSDPWFDISESAKDLVRKMLVRDPRKRITTHEVLRHPWIQVDGVAPDKPLDSAVLSRLKQFSVTNKLKKMALRVIAENLSEEEIYELKVMFKMIDTDNSGQITLEKLKAGLKMLGANLSEPEILDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLVAAFSFFDRSGSGYITQDELQEACEEFGIGNVCLEEMIQEADRNNDGRIDYNEFVAMMQRGNADLSKNGLKGGTDFSIGFREVLSVC* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1723 590 SUPERFAMILY Protein kinase-like (PK-like) 123 384 IPR011009 -
Gso3g1723 590 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
Gso3g1723 590 Pfam Protein kinase domain 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1723 590 CDD EFh 430 490 IPR002048 GO:0005509
Gso3g1723 590 Pfam EF-hand domain pair 429 491 IPR002048 GO:0005509
Gso3g1723 590 Pfam EF-hand domain pair 503 562 IPR002048 GO:0005509
Gso3g1723 590 Gene3D Transferase(Phosphotransferase) domain 1 202 394 - -
Gso3g1723 590 ProSiteProfiles Protein kinase domain profile. 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1723 590 MobiDBLite consensus disorder prediction 77 99 - -
Gso3g1723 590 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Gso3g1723 590 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Gso3g1723 590 Gene3D - 395 566 - -
Gso3g1723 590 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Gso3g1723 590 MobiDBLite consensus disorder prediction 77 95 - -
Gso3g1723 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gso3g1723 590 ProSitePatterns EF-hand calcium-binding domain. 545 557 IPR018247 -
Gso3g1723 590 SMART serkin_6 125 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1723 590 SMART efh_1 536 564 IPR002048 GO:0005509
Gso3g1723 590 SMART efh_1 466 494 IPR002048 GO:0005509
Gso3g1723 590 SMART efh_1 430 458 IPR002048 GO:0005509
Gso3g1723 590 SMART efh_1 502 530 IPR002048 GO:0005509
Gso3g1723 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 569 - -
Gso3g1723 590 ProSiteProfiles EF-hand calcium-binding domain profile. 537 567 IPR002048 GO:0005509
Gso3g1723 590 SUPERFAMILY EF-hand 412 563 IPR011992 -
Gso3g1723 590 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Gso3g1723 590 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 48 569 - -
Gso3g1723 590 CDD STKc_CAMK 125 382 - -
Gso3g1723 590 Gene3D Phosphorylase Kinase; domain 1 107 201 - -
Gso3g1723 590 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1723 Gso-Chr3 43083501 43087961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1723 53 565 EF-hand Containing Proteins AT3G10660 70.307 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso3g1723 Pkinase 9.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1723 K13412 - gmx:100814475 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1690 19 45840754 45845220 Gso3g1723 3 43083501 43087961 GST
Gso3g1723 3 43083501 43087961 Gso10g1107 10 32126107 32133322 PCT
Gso2g1638 2 38585037 38589690 Gso3g1723 3 43083501 43087961 PCT
Gso10g0745 10 10475735 10481433 Gso3g1723 3 43083501 43087961 PCT