Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1697 ATGGCCGATAAGCACGGAAGAAGCTGCTGTTGCTGCCTCTTTGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGTTGGCCTCGTATTCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAATTCCAGGTCACGGAAGCGGACCTAACCCAATTTGATTACTACACCAACAATCACACTCTCCACTACAACATGGTGCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGCGCCGTTTTTTCGGGGAAGAAGGTGTTGATGCTCAACAGCGAACAAGTCTCTAAGTTGAACCAAGACAAGAGTGATGGGGTTTATGACATCTACGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCCATATCCGGTAACTTGAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCCTTCAGTAAAAGTGGCACCTTTACTCTCTTTGAGACCACCAAATGTTCTGTCCATTTCTAG 612 0.482 MADKHGRSCCCCLFGILWKILVALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNHTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGKKVLMLNSEQVSKLNQDKSDGVYDIYVKLNFRIRFRLGDSISGNLKPKVKCHLKVPFSKSGTFTLFETTKCSVHF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1697 203 PANTHER OS05G0367900 PROTEIN 4 201 IPR044839 GO:0098542
Gso3g1697 203 Pfam Late embryogenesis abundant protein 73 178 IPR004864 -
Gso3g1697 203 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1697 Gso-Chr3 42816678 42817677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1697 38 186 SNARE and Associated Proteins AT1G32270 34.228 3.81e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1697 - - gmx:547482 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1697 3 42816678 42817677 Gso3g1697 3 42816678 42817677 ECH
Gso19g1666 19 45568706 45569647 Gso3g1697 3 42816678 42817677 GST
Gso3g1697 3 42816678 42817677 Gso10g0693 10 9277592 9278521 PCT
Gso10g0693 10 9277592 9278521 Gso3g1697 3 42816678 42817677 PCT