Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1696 ATGGCCGATAAGCAACCCCACTTGAACGGCGCTTATTACGGTCCCGCCATTCCTCCGGCGGAGCAACCACGCTACCGCCCTCACAGTCACCGCGGAAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGCCTCGCGGTCCTCATCTTCTGGCTGGTGGTTCAACCCCGTTCCTTCCAGTTCCACGTCACGGAAGCCGACCTAACACAATTTGATTACTATACCAACAACAACACCCTTCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAACATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCAAGTTACGATGTCATAACACACATGAACTCCTTCCGCCAGTACAAGAAGAGCTCCAGCCCCATGAGCGCCGTTTTCACAGGGCAACAATTGCTGATGCTGAACAATGATCAAGTCTCAGAGTTCAACCAAGACAGGAATACTGGTGTTTATGACATCTATGTGAAGCTCTACTTCAGGATGAGGTTCAGGCTCGGGGACTTTATATCCAATGACTACAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCTTTCAGTAAAAATGGCACCTTTACTCTGTTTCAGACCACCAAATGTGATGTCGATTTCTAG 690 0.4899 MADKQPHLNGAYYGPAIPPAEQPRYRPHSHRGRSCCCCLFGILWKILVALIVLVGLAVLIFWLVVQPRSFQFHVTEADLTQFDYYTNNNTLHYNMVLNFTARNPNKKLNIYYDKVEALAFYEDVRFASYDVITHMNSFRQYKKSSSPMSAVFTGQQLLMLNNDQVSEFNQDRNTGVYDIYVKLYFRMRFRLGDFISNDYKPKVKCHLKVPFSKNGTFTLFQTTKCDVDF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1696 229 Pfam Late embryogenesis abundant protein 99 205 IPR004864 -
Gso3g1696 229 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 227 - -
Gso3g1696 229 PANTHER OS05G0367900 PROTEIN 22 227 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1696 Gso-Chr3 42813690 42814726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1696 64 212 SNARE and Associated Proteins AT1G32270 34.899 3.72e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1696 - - gmx:100795302 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1665 19 45564760 45565663 Gso3g1696 3 42813690 42814726 GST
Gso3g1696 3 42813690 42814726 Gso10g0692 10 9250829 9251806 PCT
Gso10g0692 10 9250829 9251806 Gso3g1696 3 42813690 42814726 PCT