Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1695 ATGGCCGATAAGCAGCCACACTTGAACGGTACCTATTACGGTCCCGCCATTCCCCCGGCGGAACAACCACGCAATCGCCATCACCACGGAAGAAGCTGCTGTTGCTGCCTCTTTGGAATCTTGTGGAAGATTCTGGTTGCACTCATCGTCCTCGTTGGCCTCGTATTCCTCATATTCTGGCTGGTGGTTCAACCCCGCTCCTTCAAGTTCCAGGTCACGGAAGCGGACCTAACCCAATTTGATTACTACACCAACAATCACACTCTCCACTACAACATGGTGCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGCCCCATGAGCGCCGTTTTCTCGGGGAAGAAGGTGTTGATGCTCAACAGCGAACAAGTCTCTAAGTTGAACCAAGACAAGAGTGATGGGGTTTATGACATCTACGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCCATATCCGGTAACTTGAAGCCCAAGGTCAAATGTCACCTCAAGGTTCCCTTCAGTAAAACTGGCACCTTTACTCTCTTTGAGACCACCAAATGTTCTGTCCATTTCTAA 684 0.4956 MADKQPHLNGTYYGPAIPPAEQPRNRHHHGRSCCCCLFGILWKILVALIVLVGLVFLIFWLVVQPRSFKFQVTEADLTQFDYYTNNHTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGKKVLMLNSEQVSKLNQDKSDGVYDIYVKLNFRIRFRLGDSISGNLKPKVKCHLKVPFSKTGTFTLFETTKCSVHF* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1695 227 Pfam Late embryogenesis abundant protein 97 202 IPR004864 -
Gso3g1695 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Gso3g1695 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1695 Gso-Chr3 42808087 42809160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1695 62 210 SNARE and Associated Proteins AT1G32270 34.228 6.46e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1695 - - gmx:100794249 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1664 19 45561445 45562367 Gso3g1695 3 42808087 42809160 GST
Gso3g1695 3 42808087 42809160 Gso2g1678 2 39836056 39837100 PCT
Gso3g1695 3 42808087 42809160 Gso10g0687 10 9088381 9089426 PCT
Gso2g1678 2 39836056 39837100 Gso3g1695 3 42808087 42809160 PCT
Gso10g0687 10 9088381 9089426 Gso3g1695 3 42808087 42809160 PCT