Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1694 ATGGCAGATTATAAGCAACACCACGGAAGAAGCTGCGGCTGCTGCTGCCTCTTTGGAATCTTGTGGAAGATTGTGGTTGCACTCATTGTCCTCGTTGGTCTTGTATTCCTCATATTTTGGCTGGTTGTTCAACCCCGCTACTTCAAGTTCCACGTCACGGAAGCGGACCTAACTCAATTTGAGTACTATCCAAACAACAACACCCTTCACTACAACATGGTCCTCAATTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAAGTTGAGGCATTAGCATTCTACGAGGATGCCAGGTTCGCCAATTACGATGTCATAACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCACCAGTCCCATGAGCGCCGTTTTCTCGGGGCAGAAGGTGTTGATGCTCAACAACGAACAAGTCTCTCAGTTCAACCAAGACAAGAGTGTTGGAGCTTATGATATCTATGTGAAGCTCAACTTCAGGATTCGGTTCAGGCTCGGGGACTCGATTTCCCGTCACTTGAAGCCCAAGGTCAAATGTGATCTCAAGGTTCCCTTGAACAAAAGTGGCACCTTTACTCTGTTTCAGACCACCAAGTGCCATGTCAATGTCTAG 624 0.4728 MADYKQHHGRSCGCCCLFGILWKIVVALIVLVGLVFLIFWLVVQPRYFKFHVTEADLTQFEYYPNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDARFANYDVITHMNSFRQYKKSTSPMSAVFSGQKVLMLNNEQVSQFNQDKSVGAYDIYVKLNFRIRFRLGDSISRHLKPKVKCDLKVPLNKSGTFTLFQTTKCHVNV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1694 207 Pfam Late embryogenesis abundant protein 77 183 IPR004864 -
Gso3g1694 207 PANTHER OS05G0367900 PROTEIN 6 205 IPR044839 GO:0098542
Gso3g1694 207 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1694 Gso-Chr3 42804373 42805253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1694 42 189 SNARE and Associated Proteins AT1G32270 33.784 3.42e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1694 - - gmx:100806990 413.305