Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1693 ATGGCCGATAAGCAACCCCACTTGAATGGTGCTTATTACGGTCCCGCCATTCCCCCGGCGGAGCAACCACACTACCGCCCTAGCCGCGAAAGAAGCTGCTGTTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGCCTCGCGGTCCTCATCTTCTGGCTGGTGGTTCAACCCCGTTCCTTCAAGTTCCACGTCACGGAAGCCGACCTAACACAATTTGATTACTATACCAACAACAACACCCTTCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAACTCAGCATATACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCCAATTACAGTGTGATAACGCACATGAACTCCTTCCGCCAGTACAAGAAGACCACCAGCCACATGAGCGCCGTTTTCTCGGGGCAGCAAGTGTTGCCGCTCGACAACGACCTAGTCTCAGAGTTGAACCAAGACAAGAGTGGTGGGGTGTACGAGATCGATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTCGGGGATGTTAAAACCCGTCGCTTCAAGCCCGAGGTCAAATGTGATATCAGGGTTCCCTTGAGGACCAATGGCAGCGTAACTTTGTTTCAGACCACCAAGTGTGATGTCGATTACTAG 684 0.5117 MADKQPHLNGAYYGPAIPPAEQPHYRPSRERSCCCCLFGILWKILVALIVLVGLAVLIFWLVVQPRSFKFHVTEADLTQFDYYTNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFANYSVITHMNSFRQYKKTTSHMSAVFSGQQVLPLDNDLVSELNQDKSGGVYEIDVKLYFRIRFRLGDVKTRRFKPEVKCDIRVPLRTNGSVTLFQTTKCDVDY* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1693 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
Gso3g1693 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Gso3g1693 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1693 Gso-Chr3 42799349 42800283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1693 62 214 SNARE and Associated Proteins AT1G32270 33.987 5.81e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1693 - - gmx:100793725 460.299