Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1692 ATGTCCCAGTTGAACGGAGCCTACTACGGCCCCTCCATCCCGCCGCCGAAAACTTCCTACCACCGTCCTGGGCGCGGCGGAGGCCTCGGCTGCTGCTGCGGGTGCCTCTTCAGCCTCATCTTCAAGCTCATCCTAACCGTGATCATCATCATTGGCATCGCCGTGTTCCTTTTCTGGCTCATAGTCCGTCCCAACGTGGTGAAATTCCACGTCACCGAGGCCACCCTGACGCAGTTCAACTACACCCCCAACAACACGCTCCACTACGACCTCGCCCTCAACATCACGGTCCGAAACCCCAACAAGAGGCTCGGAATCTACTACGACCGCATCGAGGCGCGTGCAATGTTCCACGACGCGAGGTTTGATTCCCAGTTCCCGGAACCATTCTACCAGGGCCACAAGAGCACCAACGTGCTGAACCCGGTGTTTAAGGGTCAGCAATTGGTGCCACTCAACGCTGACCAATCCGCGGAACTGAAGAAGGAGAACGCCACTGGGGTGTACGAGATCGATGTGAAGATGTACCTTAGGGTCAGGTTCAAGTTGGGTGTCTTCAAGACCAAGACGCTTAAGCCCAAAGTATCATGCGACTTACGTGTTCCTTTGAAAGGAAGCGCCGGTGCTGGTGTCTTTCAGACCACCAAGTGCGACTGGGATCGCTGA 666 0.5631 MSQLNGAYYGPSIPPPKTSYHRPGRGGGLGCCCGCLFSLIFKLILTVIIIIGIAVFLFWLIVRPNVVKFHVTEATLTQFNYTPNNTLHYDLALNITVRNPNKRLGIYYDRIEARAMFHDARFDSQFPEPFYQGHKSTNVLNPVFKGQQLVPLNADQSAELKKENATGVYEIDVKMYLRVRFKLGVFKTKTLKPKVSCDLRVPLKGSAGAGVFQTTKCDWDR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1692 221 PANTHER OS05G0367900 PROTEIN 22 219 IPR044839 GO:0098542
Gso3g1692 221 Pfam Late embryogenesis abundant protein 94 197 IPR004864 -
Gso3g1692 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 22 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1692 Gso-Chr3 42796238 42797309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1692 61 209 SNARE and Associated Proteins AT1G32270 40.397 7.29e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1692 - - gmx:100793187 422.165