Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1685 ATGTCTGGCTCCCGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAAGACCAAGCCTGCGTCGCATATTCCACCCAAAGCCAAAACCAAAGAATCTTAACAACAACACCAATTACCGAAAGCACAAACATTCTTCTTCTTCTTCTGCTTCTTCTTCCTTTTTTGCAAGCCAATGGGGGGGTGACAGCACCAGCGCCACCCCCACCAACACCAACACCACATTCTCACCCTACGTTGATTCCTCACACTTTTCTGACTCAGATTCCTACGTGAAGGCTGTGGGGGGTTTAGGCAGAGCTGGGAAAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTTGATTTCAGACATTCCATGCTTCAAATGATATTGGAGAACGAGATATACTCCAAGCAGGATCTCAGAGAGCTTCTGAACTGCTTTCTTCAGCTGAATTCACCGCATCATCATGGTGTTATAGTCAGAGCTTTCACTGAGATCTGGAACGGTGTTTTCTCTGTGAGGTCCAGTTCTCACATCCACCTTAAGCCACGTGAGTTCTAA 573 0.4764 MSGSRKKLLLNTVSVKLGCGTCRRPSLRRIFHPKPKPKNLNNNTNYRKHKHSSSSSASSSFFASQWGGDSTSATPTNTNTTFSPYVDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNGVFSVRSSSHIHLKPREF* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1685 190 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 179 IPR038933 GO:0045892
Gso3g1685 190 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 179 - -
Gso3g1685 190 MobiDBLite consensus disorder prediction 37 57 - -
Gso3g1685 190 Pfam Transcriptional repressor, ovate 118 174 IPR006458 -
Gso3g1685 190 MobiDBLite consensus disorder prediction 28 57 - -
Gso3g1685 190 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 112 172 IPR006458 -
Gso3g1685 190 ProSiteProfiles OVATE domain profile. 114 173 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1685 Gso-Chr3 42740546 42741584 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso3g1685 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1685 - - gmx:100804319 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1685 3 42740546 42741584 Gso3g1685 3 42740546 42741584 ECH