Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1684 ATGGGCAAGAAAATGAAGCTCCCTTCCCTACTACACAACAAACCCTCTTCTTCTTCTTGGCCCTGCCACCAACCGCGAACCCTCTCTTTCCGAACCCAAAACGACGCCGCATTCAAAACCATCAACGCCGCTTACTTGGACACGCTGGAGAGCTCCGAAACTTCCTTCTTCACAGTCTCCCCTGACTCCGGAAGCTTCTCAACTGCCTCAGAACAAGATTCTAGAAGACCCCACTCACTAGACTCCGTCATTCGCGGCTTGCGTTCCGACCGCTTATTCTTCGAGCCAGACGAGACAAGCTCCATATTAGAGGCCAGACCACCACCACCACCACCACCACCATCACCACCACCACCACCAACAACAACAACAACGTTGCCGTTCAAAGACAGCGTTGTCATGTCCGTGGACTCTCAGGACCCTTACGTCGATTTCCGCAGGTCCATGGAGGAGATGGTGGAGGCGCAGTGCGTCAAGGACTGGGAGGGTCTCCAAGAGCTTCTGTGTTGGTATTTGAAAGTCAATGGAAAAACCAACCATGGCTATATTGTTGGCGCTTTCGTCGATTTATTGGTCGCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTTCTCGGTTTCTTCTTCTTCTAATAATAATAACAACTCCCAAATAGTATCTCCTTCTTCCCCTTTATCTTTTTATAGCTCTTCTCTCTCTTCCTCTTGCAGCACTCGCTGTGTTTCTTGTTTGGAAGCTGAGGTCGTCGAGGTTCATAATGATATAGCCACTAGTACTCCTACTTCTTCTTTCTTGTTACAACAAGTTAGGGAAGACCAGCCATCATCTTCTTCTTCTTCTTCCTATTTGAATTAA 852 0.48 MGKKMKLPSLLHNKPSSSSWPCHQPRTLSFRTQNDAAFKTINAAYLDTLESSETSFFTVSPDSGSFSTASEQDSRRPHSLDSVIRGLRSDRLFFEPDETSSILEARPPPPPPPPSPPPPPTTTTTLPFKDSVVMSVDSQDPYVDFRRSMEEMVEAQCVKDWEGLQELLCWYLKVNGKTNHGYIVGAFVDLLVASSSSSSSSSFSVSSSSNNNNNSQIVSPSSPLSFYSSSLSSSCSTRCVSCLEAEVVEVHNDIATSTPTSSFLLQQVREDQPSSSSSSSYLN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1684 283 MobiDBLite consensus disorder prediction 58 73 - -
Gso3g1684 283 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 235 - -
Gso3g1684 283 ProSiteProfiles OVATE domain profile. 132 193 IPR006458 -
Gso3g1684 283 MobiDBLite consensus disorder prediction 101 130 - -
Gso3g1684 283 MobiDBLite consensus disorder prediction 1 26 - -
Gso3g1684 283 MobiDBLite consensus disorder prediction 58 80 - -
Gso3g1684 283 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 132 193 IPR006458 -
Gso3g1684 283 MobiDBLite consensus disorder prediction 11 26 - -
Gso3g1684 283 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 235 IPR038933 GO:0045892
Gso3g1684 283 SUPERFAMILY Formin homology 2 domain (FH2 domain) 109 120 - -
Gso3g1684 283 MobiDBLite consensus disorder prediction 103 124 - -
Gso3g1684 283 Pfam Transcriptional repressor, ovate 138 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1684 Gso-Chr3 42725126 42726493 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso3g1684 Ovate 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1684 - - gmx:100803791 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1684 3 42725126 42726493 Gso20g0892 20 38439738 38440727 ECH
Gso3g1684 3 42725126 42726493 Gso3g1684 3 42725126 42726493 ECH
Gso19g1655 19 45486440 45487749 Gso3g1684 3 42725126 42726493 GST
Gso3g1684 3 42725126 42726493 Gso2g1699 2 40389822 40391073 PCT
Gso3g1684 3 42725126 42726493 Gso10g0670 10 8618099 8619248 PCT
Gso2g1699 2 40389822 40391073 Gso3g1684 3 42725126 42726493 PCT
Gso10g0670 10 8618099 8619248 Gso3g1684 3 42725126 42726493 PCT