Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1669 ATGAATGAATATGGCGATGCAATACACACGCTCACTTGTTTTCCTTCGTCTCTGCAATTGAATTCCATGGCGGCCGTAAGAAAAATAATTGAGGTCAATAGAAATAAAATCTTGTCGCCATCTCTTCTCTCTTTTCGCCGGGGAATTGCTTACAAGCTTTTTGTTGGAGCTAGCTTCTTGACACTAGGATTGTCCTTCTACACCACAGAGAATGCATTATCAGAGGCATTCTCCAATTACGGGCAAGTTATTGAAGCCAAAATTGTAACAGATAGGGTGTCAGACAGATCTAAGGGATTTGGGTTTGTCACCTTTGCTTCTCAAGACGAGGCTGAGAATGCCATAGAAGATATGAAAGGAAAGACATTAAATGGACGTGTTATCTTTGTTGATTATGCAAAGCCCAATATCAACACTCGTGGTGAAATTCCAATTGCCAGAGGACCTCCTGAGCCAACATCAACACCAGATACTTGA 477 0.4151 MNEYGDAIHTLTCFPSSLQLNSMAAVRKIIEVNRNKILSPSLLSFRRGIAYKLFVGASFLTLGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDMKGKTLNGRVIFVDYAKPNINTRGEIPIARGPPEPTSTPDT* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1669 158 SMART rrm1_1 52 131 IPR000504 GO:0003723
Gso3g1669 158 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 57 135 IPR000504 GO:0003723
Gso3g1669 158 Gene3D - 49 151 IPR012677 -
Gso3g1669 158 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 23 153 - -
Gso3g1669 158 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 128 IPR000504 GO:0003723
Gso3g1669 158 PANTHER TRANSFORMER-2-RELATED 23 153 - -
Gso3g1669 158 SUPERFAMILY RNA-binding domain, RBD 63 148 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1669 Gso-Chr3 42579980 42581766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1669 54 143 Eukaryotic Initiation Factors Gene Family AT2G23350 30.000 1.52e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1669 - - gmx:100527079 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1669 3 42579980 42581766 Gso3g1669 3 42579980 42581766 ECH