Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1663 ATGGGAAATATGCCACCAGGTTATCGCTTCTACCCCACAGAAGAGGAGCTGATTTTGTTCTATCTTCACAATAAGCTTGAAGGAGAAAGGGAAGACATGAATCGAGTTATTCCAGTCGTTGATATATACGACTACAACCCATCTCAACTCCCACAAATTTCAGGAGAGGCAAGTATGGGAGACACGGAGCAATGGTTCTTTTTCATTCCGAGGCAAGAGAGTGAAGCCAGAGGAGGAAGACCAAAGCGTCTCACAACTACAGGGTACTGGAAGGCCACAGGGTCTCCTAATCATGTTTATTCTTCGGATAATCACATCATCGGAATTAAAAGGACTATGGTTTTCTATAGTGGAAGAGCTCCAAACGGAACCAAAACCGATTGGAAGATGAATGAGTACAGTGCCATCAAAGGTGAACCATCATCCTCTATTTCCAATAAGGCTGTTCCCACGTTAAGGAAGGAATTCAGTTTATGCCGAGTGTACAAAAAATCAAAGTGTTTGAGGGCATTTGACAGACGACCACCTCCAAGGAGGGACGTAGTTAGCTATTCCGGTGCTCAAAATGTAGAAGAGCAACAAAAGGGTTCAACATTATATGATTATCATCATAAAATAATGGTGAAGAGAAGTACAACGTGTTCACCAGAGACTTCTACTTCCTCCGGAGACCATGACCAACCCCCTCTTCACGGTGAGGAAACTACTCAAATGGATGTTGACCCTTTTTTGGATTGGGAGAAAGTGGATTTTTTCTTGGGATCAGAACCATGA 774 0.4315 MGNMPPGYRFYPTEEELILFYLHNKLEGEREDMNRVIPVVDIYDYNPSQLPQISGEASMGDTEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNHIIGIKRTMVFYSGRAPNGTKTDWKMNEYSAIKGEPSSSISNKAVPTLRKEFSLCRVYKKSKCLRAFDRRPPPRRDVVSYSGAQNVEEQQKGSTLYDYHHKIMVKRSTTCSPETSTSSGDHDQPPLHGEETTQMDVDPFLDWEKVDFFLGSEP* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1663 257 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 249 - -
Gso3g1663 257 MobiDBLite consensus disorder prediction 211 226 - -
Gso3g1663 257 MobiDBLite consensus disorder prediction 211 239 - -
Gso3g1663 257 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Gso3g1663 257 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Gso3g1663 257 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 249 - -
Gso3g1663 257 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Gso3g1663 257 ProSiteProfiles NAC domain profile. 4 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1663 Gso-Chr3 42533213 42535453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1663 7 251 NAC Transcription Factor Family AT5G22380 47.390 1.47e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso3g1663 NAM 3.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1663 - - gmx:100800056 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1663 3 42533213 42535453 Gso3g1663 3 42533213 42535453 ECH
Gso19g1637 19 45280198 45282508 Gso3g1663 3 42533213 42535453 GST