Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1656 ATGTTGGGAAAAAAGAGTTTCAAGAAACTGGCAAAAAAGGTGAAGAAGGGTGTAGGTGGAATTGACCCTGACCCTGTACGTCACGAGTGTTTGCTGAAGGAATATGAAGAAGAATGTGCTACTAACACACCCCCAATTGGTTTTTTTGCAGTTTATGTCGGGGAAGAGCGTCAAAGATACGTGGTTCCGACCCGTTACCTTTCTCACCCGTTATTCAAGATGCTGTTGGAGAAGGCTTACGATGAGTTTGGATTTTCACAGAGGAATGGCCTTGTAATTCCATGCAGTGTTTCCACATTTCAAGAGGTGGTGAATGCTATTGAATGCAACAACGACAAGTTTGACTTGGGAAAGTTTTTTGCAGAATTTGTTTGA 375 0.424 MLGKKSFKKLAKKVKKGVGGIDPDPVRHECLLKEYEEECATNTPPIGFFAVYVGEERQRYVVPTRYLSHPLFKMLLEKAYDEFGFSQRNGLVIPCSVSTFQEVVNAIECNNDKFDLGKFFAEFV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1656 124 Pfam Auxin responsive protein 35 106 IPR003676 GO:0009733
Gso3g1656 124 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 124 - -
Gso3g1656 124 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1656 Gso-Chr3 42485654 42486371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1656 36 110 Calmodulin-binding Proteins AT5G20810 51.899 1.14e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1656 K14488 - gmx:100784187 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1656 3 42485654 42486371 Gso3g1656 3 42485654 42486371 ECH