Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1627 ATGATGAACTCGCACAAGCAATTCTTCCCCCTCCTCTCACTTTTCTTAGTTCTCTATCTCTTAGGACAAAGGGTAGTGCTGCAAGCTGAAGCTCACCCTCGACATCGTCCAACAAAATTGTTCGTTTTCGGAGACTCATATGCTGACACAGGAAACATTCAGAAAAGTTTCTCAAATTCATGGAAGGACCCTTATGGCGTCACCTTTCCCGGCAAGCCCGCCGGTCGTTTCTCCGATGGTAGAGTCCTCACCGATTACATCGCTAAGTATTTGAGAGTGAAATCGCCAATCCCCTACAGATTGAGGAAACTGATGCCGCAACATCTGAAATATGGGATGAACTTTGCGTTTGGGGGCACTGGTGTCTTTAACACGTTTGTTCCACTCCCAAACATGACAACACAGATTGATTTCTTGGAGCAGCTCATCAAAGACAAAGTGTACAATTCCTTAGATCTCACCAATTCGGTGGCCCTTGTCTCTGTCGCTGGAAATGACTACGGTCGTTACATGCTAACAAATGGCTCCCAGGGTTTACCATCTTTCGTGGCCTCAGTGGTTAATCAAACAGCGAACAATCTGATTCGCATCAAAGGGCTGGGAGTGAAGAAAATAGCGGTGGGTGCTCTACAACCCCTTGGATGCCTTCCCCCGCAGACAGCCACAACCTCATTCCAACGGTGCAACGCCACCTCAAACGCCCTAGTACTTCTCCACAACAGCCTCCTGAACCAAGCAGTAACAAAGTTGAACCAAGAAATTACCAAGGAGCGTTCCAGCTTCGTAATCCTCAACCTTTTCGACAGCTTCATGTCGGTGTTGAACAACCCTTCCACTCACAACATTCGGAACAAGTTGACGCCGTGCTGCGTTGGCGTGAGCACTAACTACTCGTGCGGGAGCGTGGACAAGAACAATGTGAAGAAATATAGAGTCTGTGATGACCCCAAATCTGCTTTCTTTTGGGATCTGGTGCACCCTACGCAGGCTGGATGGCATGCAGTGTATAACAAGTTACGAACCATGAATGATCTTCAACACATTCTTTACTAG 1053 0.4758 MMNSHKQFFPLLSLFLVLYLLGQRVVLQAEAHPRHRPTKLFVFGDSYADTGNIQKSFSNSWKDPYGVTFPGKPAGRFSDGRVLTDYIAKYLRVKSPIPYRLRKLMPQHLKYGMNFAFGGTGVFNTFVPLPNMTTQIDFLEQLIKDKVYNSLDLTNSVALVSVAGNDYGRYMLTNGSQGLPSFVASVVNQTANNLIRIKGLGVKKIAVGALQPLGCLPPQTATTSFQRCNATSNALVLLHNSLLNQAVTKLNQEITKERSSFVILNLFDSFMSVLNNPSTHNIRNKLTPCCVGVSTNYSCGSVDKNNVKKYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNDLQHILY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1627 350 Pfam GDSL-like Lipase/Acylhydrolase 40 338 IPR001087 GO:0016788
Gso3g1627 350 SUPERFAMILY SGNH hydrolase 37 339 - -
Gso3g1627 350 Gene3D SGNH hydrolase 28 345 IPR036514 -
Gso3g1627 350 CDD SGNH_plant_lipase_like 40 339 IPR035669 -
Gso3g1627 350 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 350 - -
Gso3g1627 350 PANTHER OSJNBB0059K02.9 PROTEIN 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1627 Gso-Chr3 42267987 42272015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1627 26 335 Pollen Coat Proteome AT1G75930 27.761 8.42e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1627 - - gmx:100818373 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1604 19 45015032 45018632 Gso3g1627 3 42267987 42272015 GST