Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1626 ATGGAGCTAGAGCTTGAATCTTTTACACTGTGCACTCTGATGCAGCTCTTCACCAACATCCCCTTTGGCAGCACACTGTGTCTTTCACTGGCCATTATCATCATCACCCTCGTGATCCTCACTACCTTTTCTTCATCTCTCTTCCTTCGCTGGCCAAAAATAATCACTTTCTTCTGTAGCTGCGAAACATGCCAGGCCTATCTCACTTCAGGTTGGTCCAAAACCTTCGACAACCTTTGCGATTGGTACGCTCACCTCCTCCGAAACTCGCCGACAAAAACCATCCACATCCACGTCCTCCGAAACACCATCACCGCCAACCCCGACAACGTGGAATACATGCTCAAGACCAGGTTCCACAACTTCCCCAAGGGAAAAACGTTCTCCACCATCCTCGGCGATTTCCTCGGCCGAGGAATCTTCAACGTCGACGGAGAATCCTGGAGCTTCCAGAAGAAGATGGCGAGTCTTGAACTCAGCAAGAACTCGATAAGATCCTTCGCCTTCGAGGTCGTCAAATTCGAAATCAAAGACCGACTCATCCCTCTCCTTGTTCTGTCCAAACAAAATGACTGTGTTTTGGATTTACAAGACGTTTTCAAGAGATTCTCGTTCGACAGCATTTGTAGATTCTCCTTCGGGTTGGACCCTATGTGTCTGGAGCTGTCTCTGCCTATATCGGAGTTTGCTATGTCCTTTGACTTGGCGTCGAAACTGTCCGCGGAGAGAGCCATGTCGGTGTCCCCTCTAATATGGAAGATCAAACGGTTCCTCAACGTGGGCTCCGAGAAGAAGCTGAGAAAAGCTATTAAAATGATTGACATCTTAGCCAGAGAAGTCATAAGACAAAGAAGAAAAATGGGGTTTTCATCAATTTCACCTCATAAGGACGACTTGTTATCACGGTTCATGAGAACCATCACTGATGACACATACTTAAAAGACATTATCGTAAGTTTCTTGCTAGCCGGTCGTGATACCGTGGCTTCGGCTCTAACAAGCTTCTTTTGGCTCTTAGCAAAACACCCAGAAGTGGAATCCCAAATTCTTCTAGAAGCAGAGCAAGTAATTGGATCAGACTATAACAAAGACCTTACAAGCTATGAAGAGCTTCAACAACTGCACTATTTACAAGCTGCGGCGAATGAAAGCATGAGACTTTATCCTCCGATTCAATTCGATTCCAAGTTTTGCTTAGAAGATGATGTGTTGCCTGATGGGACTTTTGTGAAGAGAGGAACTAGGGTTACTTACCATCCCTACGCGATGGGGCGTTTGGAGGAGATATGGGGTTCGGATTGCTTTGAGTTTAGGCCAGAGAGGTGGTTGAAGGAAGGACTTTTTTGCCCTCAGAATCCGTTCAAGTATCCGGTTTTTCAAGCGGGGATAAGGGTGTGTTTGGGGAAAGAAATGGCACTGTTGGAGCTCAAGAGTGTGGCGCTTTCGTTGCTTCGGAGGTTCCACATCGAATTGGCGGCACCACCACCGCATCATCATCATCACAGTACCCCACGTTTCTCGCCAGGCCTCACTGCAACTTTTAGTTGCGGTCTTCGCGTAAAGGTACGTGAACAAGGAACCCAACAACGACAACACACTACTCAACCTCTTCATCATTCATAG 1623 0.4695 MELELESFTLCTLMQLFTNIPFGSTLCLSLAIIIITLVILTTFSSSLFLRWPKIITFFCSCETCQAYLTSGWSKTFDNLCDWYAHLLRNSPTKTIHIHVLRNTITANPDNVEYMLKTRFHNFPKGKTFSTILGDFLGRGIFNVDGESWSFQKKMASLELSKNSIRSFAFEVVKFEIKDRLIPLLVLSKQNDCVLDLQDVFKRFSFDSICRFSFGLDPMCLELSLPISEFAMSFDLASKLSAERAMSVSPLIWKIKRFLNVGSEKKLRKAIKMIDILAREVIRQRRKMGFSSISPHKDDLLSRFMRTITDDTYLKDIIVSFLLAGRDTVASALTSFFWLLAKHPEVESQILLEAEQVIGSDYNKDLTSYEELQQLHYLQAAANESMRLYPPIQFDSKFCLEDDVLPDGTFVKRGTRVTYHPYAMGRLEEIWGSDCFEFRPERWLKEGLFCPQNPFKYPVFQAGIRVCLGKEMALLELKSVALSLLRRFHIELAAPPPHHHHHSTPRFSPGLTATFSCGLRVKVREQGTQQRQHTTQPLHHS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1626 540 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 Pfam Cytochrome P450 102 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 SUPERFAMILY Cytochrome P450 77 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 Gene3D Cytochrome P450 67 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PANTHER CYTOCHROME P450 40 519 - -
Gso3g1626 540 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 40 519 - -
Gso3g1626 540 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1626 540 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1626 Gso-Chr3 42250882 42252637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1626 58 525 Cytochrome P450 AT2G27690 59.110 0.0 582