Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1625 ATGGGAGAACTACCGGTGGCTAGAACCTATGCCGTGGAGAGCCACCACCACAACTTGCTAGAGGCTGCGATTGGAGACAAGCAATTAGCCAGAGAGTCCAAAATACATAGTTATGGAAAGAGCTTCAACGGATTCGTTGCACGACTTTTACCACATGAGGCGGAGAAATTGCAAGAGGAGGACAGTGTGGTATCTGTGTTTCCAAATACACACCGTAAACTACACACAACAAGGTCGTGGGACTTTTTAGGAATGCCCCTAAACGTGAAGAGAAACTCCAAGGTGGAAAGCCATATCATTGTGGGCGTGTTAGATACAGGTATTTGGGTTGATTGCCCCAGTTTCAACGCTAAGGGCTATGGACCTCCCCCACGTAGATGGAAAGGCAAATGTGAAACGGGAGCAAACTTTACTGGCTGCAACAACAAGGTGATCGGAGCAAAATACTTCAATCTGGCGAAGAGCAACTCACCCTCGGACAACCTGAGTCCGGCGGACGACATAGGGCACGGCACTCACACGGCGTCCACGGCGGCCGGAGCAGCGGTGAAGGGTGCGAGTCTCTACGGCATTGGCAAAGGCACGGCGAGGGGCGGGGTCCCCTCAGCCCGCGTGGCCATGTACAAGGTATGCTGGTTAGACGACTGCAACGACATGGACATGCTCGCCGCCTTTGACGAAGCCATCGCCGACGGCGTCAACATCATATCCATCTCCATTGGAGGCCCCTCCCATGACTTCTTCACCGACCCAATTGCCATTGGATCGTTCCACGCCATGGGGAGAGGGATTCTCACTTCTTGCTCTGCCGGCAACGGTGGCCCTCGCCCCATGACGGTCGAGAATGTCGCTCCCTGGCTTTTGACGGTGGCTGCTAGCGCCGTTAATCGCCAGTTCACTACACTTGTTGCTTTCGGTGATGGAAAGAACATAACAGGACTTTCTATTAATACCTTTGCCCCCAAGAAAAAGATGTATCCATTGACTAGTGGGCTCCTTGCGTCGAACCTTAGTGGAGAAGGCTACGGCAGTGCTAGTGGTTGTGATTATGGGACTCTAAGTAAGGAAAAGGTACAGGGCAGGATAGTGTACTGCGTTGGGGGAACAGGCACTCAGGATTTAACCATCAAAGAATTAGGGGGAGCAGGTGCCATCATAGGCCTTGATGAGGAAATTGACGCCTCCTACACCACAGTCATTCCAGGGACATTTGTTGAAGCCAGTACTGTGGGCAATACCATTGATCTCTACATCAATTCCACAAAGAATGCTAGAGCGGTTATTCACAAGACAACAACTACAGAAGTCCCTGCTCCATTCCTTGCTTCTTTTTCATCTAGAGGTCCTCAAACAATCACCCCAAATATCCTCAAGCCTGACTTGGTTGCCCCGGGAGTGAACATACTAGCTGCATATTCCAAATTGGTAACACTAACAGGGTACCATGAAGACAATCGTTACGATGTATTTAACATATTATCAGGAACATCTATGGCATGTCCACATGCCACTGCAACCGCTGCCTATGTCAAATCCTTCCACCCTGATTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACTGCAACTCCCATCAAAATCAGTGACAATTTCACGGAACTGGGATCTGGGTCGGGTCAGATTGACCCTGTAAAAGCATTACATCCTGGCCTGGTTTACGACATGAGAATAAGCTCCTACATCGGCTTCCTTTGCAAGGCAGGCTTCAACAATACCAACATTGGCATACTGATAGGCAAACCAAATTTCAATTGCACAAGCATTAAGCCTTCGCCAGGCACTGATGGAATCAACTACCCCAGCATGCATATCCAGCTCTTGAGTGCAAGTGATAGAATTTCTGCAGTTTTTCTTCGAACTGTGACTAATGTAGGATCTCGAAATTCAACTTACAAGGCTAAAGTTACAACACCCAAGGGTCTTTCTGTGAAGGTCAAGCCAAATATATTGAAGTTTAGTCGGTTGCACCAAAAACTGTCGTTTAAGGTTGTGCTGAAGGGACCTCCAATGCCGGAGGACACATTTGTGGAATCTGCATCACTTGAATGGAAAGACTCTGAACACACTGTCAGAAGTCCGATACTTGTCTTTAAGCCTATGACTGTGTATTGA 2136 0.4869 MGELPVARTYAVESHHHNLLEAAIGDKQLARESKIHSYGKSFNGFVARLLPHEAEKLQEEDSVVSVFPNTHRKLHTTRSWDFLGMPLNVKRNSKVESHIIVGVLDTGIWVDCPSFNAKGYGPPPRRWKGKCETGANFTGCNNKVIGAKYFNLAKSNSPSDNLSPADDIGHGTHTASTAAGAAVKGASLYGIGKGTARGGVPSARVAMYKVCWLDDCNDMDMLAAFDEAIADGVNIISISIGGPSHDFFTDPIAIGSFHAMGRGILTSCSAGNGGPRPMTVENVAPWLLTVAASAVNRQFTTLVAFGDGKNITGLSINTFAPKKKMYPLTSGLLASNLSGEGYGSASGCDYGTLSKEKVQGRIVYCVGGTGTQDLTIKELGGAGAIIGLDEEIDASYTTVIPGTFVEASTVGNTIDLYINSTKNARAVIHKTTTTEVPAPFLASFSSRGPQTITPNILKPDLVAPGVNILAAYSKLVTLTGYHEDNRYDVFNILSGTSMACPHATATAAYVKSFHPDWSPAAIKSALMTTATPIKISDNFTELGSGSGQIDPVKALHPGLVYDMRISSYIGFLCKAGFNNTNIGILIGKPNFNCTSIKPSPGTDGINYPSMHIQLLSASDRISAVFLRTVTNVGSRNSTYKAKVTTPKGLSVKVKPNILKFSRLHQKLSFKVVLKGPPMPEDTFVESASLEWKDSEHTVRSPILVFKPMTVY* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1625 711 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Gso3g1625 711 Gene3D Peptidase S8/S53 domain 99 568 IPR036852 GO:0004252|GO:0006508
Gso3g1625 711 Pfam Fibronectin type-III domain 605 704 IPR041469 -
Gso3g1625 711 Pfam Subtilase family 97 532 IPR000209 GO:0006508|GO:0008236
Gso3g1625 711 CDD PA_subtilisin_like 306 428 - -
Gso3g1625 711 ProSitePatterns Serine proteases, subtilase family, serine active site. 495 505 IPR023828 -
Gso3g1625 711 CDD Peptidases_S8_3 73 531 IPR034197 -
Gso3g1625 711 ProSiteProfiles Serine proteases, subtilase domain profile. 79 555 - -
Gso3g1625 711 Gene3D - 296 434 - -
Gso3g1625 711 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 706 IPR045051 -
Gso3g1625 711 PANTHER CUCUMISIN PROTEIN 1 706 - -
Gso3g1625 711 Gene3D - 572 706 - -
Gso3g1625 711 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 101 111 IPR023827 -
Gso3g1625 711 Pfam Peptidase inhibitor I9 9 75 IPR010259 -
Gso3g1625 711 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Gso3g1625 711 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Gso3g1625 711 PRINTS Subtilisin serine protease family (S8) signature 494 510 IPR015500 -
Gso3g1625 711 SUPERFAMILY Subtilisin-like 74 559 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1625 Gso-Chr3 42240437 42244911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1625 1 529 Subtilisin-like Serine Gene Family AT5G03620 62.639 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1625 - - gmx:100793716 1412.9