Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1615 ATGGCTCAGAAGTACTTGCACGAGCTACTTGAGGAGGATCAAGAACCGTTCTTTCTAAACAAGTATATTTCCGATAGGCGAACCCAGATGAAGAGGCCTTCCCCGAAGACGAGTCTGCAAGTGAAGAAACGCAAATCAATCAATCCAAACACAAACTTCCCGAGAAATCTCTGCAAAAGCGCTTGTCTTTTCTCTCTCACAGACACCCCCGACCTCAGAAAATCACCACTCTTCGAATTCACTTCCCCAGTCAAAAGCCCTTGCAAATCACCAAACGCTATTTTTCTACACATCCCTTCTAGAACCGCTGCTCTGCTTCTAGAAGCCGCTCTCAGGATCCAGAAACACTCCTCACATGTTACTTCAAAGCCCAAAACAAAAGCCCATTCCTTCGGCCTCTTCGGGTCACTGTACAAGAGACTCACTCAACGGAACCAGAAAAAGCATGAGATAGAGAGTGGTGGAGGCGTTAAGATTTCCGTGAAGGATGTTTTGAAGTGGGATTCTTCTGTGGGGCGAAGAAAAGTTTCTAAAGCCAACGGGAAATGCAAGGAGCAAGAAGAAACAGTGAATGTGAATGTGAATGTGAATACGTGTTCTTACAATGGTAGTAGTGCTCTTTGGTCAGAGAGCAATGAAGATAACAAATCACTAGACATGGAAACCTCAAGTAGTGGCTACTACTCTGAAGAGATTCACTTCGTAACCAATCACAAACAGTACTCCACGTGCTTCTGCGAAAGCCCGTTCCGTTTTGTTCTCCAAACAAGTTCCCCTTCCTCCGGTCATCACACGCCGGAGCTTCCCTCGCCGAGTCGCCACCCAACTGAGGAGAAAGAAAGTAATGAAGGTGAGAGTGTGAAGAAATTCGAATCAGGGGAAGAGGAGGAGGAAGATAAGGAACAGTGCAGTCCAGTGAGTGTGTTAGACCCTCCATTCGAGGACGATGACGAAGGGCATGGAAACGGTGATGAAGAAGAAGAGGAAGAGGAGGAGGGTGGTTTTGATATGGAGTGCAGTTATGCGATTGTACAGAGAGCCAAGCAGCAGTTATTGTACAAACTTTGTAGATTTGAGAAACTGGCGGAGTTGGATCCAGTAGAACTTGAGAAAAGAATGCAGGACCAAGAAGAGGACGAGGATGAAACATTTATGGAAGAGGAACATGGTGATGATGAGAACAACCAAGCATCATACAAAGAAAATGACTTCATAGAACTAATTTTCCAAGCTCTGTGCCAATCAAGGGTCCATGACAGACAGCAAATCCCAGAGGACTTTAAGAAGCTGGTATCTGATCTCATTATGGAAGAAGAGAGAGCACTTGATTCCTTAGAAGATAGGGACATGGTGATAAGAAGGATATGCAAGAGGCTGGAATTATGGAAAGAAGTGGAGTCTAACACAATTGACATGATGATAGAAGATGACTTCTCTAGAGAGGATGGTGTGTGGAGGAAAAATATAGAGCAGATAAGAAATATGGCTGGGGAGCTTGAGCTTGCTATCTTTGGCTTTCTGGTAGAGGAATTTTCAGAGGAACTAGTATGTTAA 1554 0.4466 MAQKYLHELLEEDQEPFFLNKYISDRRTQMKRPSPKTSLQVKKRKSINPNTNFPRNLCKSACLFSLTDTPDLRKSPLFEFTSPVKSPCKSPNAIFLHIPSRTAALLLEAALRIQKHSSHVTSKPKTKAHSFGLFGSLYKRLTQRNQKKHEIESGGGVKISVKDVLKWDSSVGRRKVSKANGKCKEQEETVNVNVNVNTCSYNGSSALWSESNEDNKSLDMETSSSGYYSEEIHFVTNHKQYSTCFCESPFRFVLQTSSPSSGHHTPELPSPSRHPTEEKESNEGESVKKFESGEEEEEDKEQCSPVSVLDPPFEDDDEGHGNGDEEEEEEEEGGFDMECSYAIVQRAKQQLLYKLCRFEKLAELDPVELEKRMQDQEEDEDETFMEEEHGDDENNQASYKENDFIELIFQALCQSRVHDRQQIPEDFKKLVSDLIMEEERALDSLEDRDMVIRRICKRLELWKEVESNTIDMMIEDDFSREDGVWRKNIEQIRNMAGELELAIFGFLVEEFSEELVC* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1615 517 MobiDBLite consensus disorder prediction 374 389 - -
Gso3g1615 517 MobiDBLite consensus disorder prediction 370 396 - -
Gso3g1615 517 PANTHER OS04G0572500 PROTEIN 1 517 - -
Gso3g1615 517 MobiDBLite consensus disorder prediction 270 295 - -
Gso3g1615 517 Coils Coil 428 448 - -
Gso3g1615 517 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 517 - -
Gso3g1615 517 MobiDBLite consensus disorder prediction 317 335 - -
Gso3g1615 517 MobiDBLite consensus disorder prediction 257 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1615 Gso-Chr3 42091148 42094823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1615 2 314 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 43.114 1.82e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1615 - - gmx:100790018 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1615 3 42091148 42094823 Gso3g1615 3 42091148 42094823 ECH
Gso19g1595 19 44887796 44891464 Gso3g1615 3 42091148 42094823 GST
Gso3g1615 3 42091148 42094823 Gso10g0583 10 6743426 6747605 PCT
Gso10g0583 10 6743426 6747605 Gso3g1615 3 42091148 42094823 PCT