Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1596 ATGGGGTGGACTTCAGAACATCCTTCACTCTTTCTCCTACTCCTGTCTCTGTCTCTCCCCCTCTTCCTCTTCCTCCTCCGCCGCCGCAACAGCAAAACCTCATCCTCAAACCATCGTCTTCCGCCGGGACCACCGGGCTGGCCAGTCTTCGGAAACATGTTCCAGCTCGGAGACATGCCTCACCGCACCCTCACCAATCTAAGGGACAAGTTCGGCCCCGTGGTGTGGCTCAAAATCGGCGCCATGAACACCATGGCGATTCTCTCCGCCGAAGCCGCCACCGTGTTCTTCAAGCACCACGACCACGCCTTCGCGGACCGAACCATAACCGAAATCATGCGTGTCCACAACTACGACAAGTCATCCCTGGCCCTCGCCCCTTATGGCCCTTACTGGCGCCTCATGCGGCGCCTCGTGACCGTGGACATGCTCGTTTCAAAACGCATAAACGACACCGCATCCATCCGTCGGAAATGCGTAAACGACATGATCAACTGGGTGGCGAAAGAAGCGAGCAAGTCAGAACATGGTCGTGGGGTCCACGTGTCGCGTTTTGTTTTCCTGATGACGTTTAACTTGTTCGGGAACCTGATGCTGTCACGGGACTTGTTTGACCCGGAATCCGAAGACGGGTCGGAGTTTTTCAGCGCGATGATGGGGCTGATGGAGTGGACGGGGCACGCTAACGTGACCGACCTGTTTCCCTGGCTGAGTTGGCTGGATCCGCAGGGACTGAGGAGGAAGATGGACAGGGACATGGGGAAGGCGCTGGGAATCGCGTCCAGGTTCGTGAAACAGCGTTTGGAACAGCAGCTGCACCGTGGCACCAACAAGTCAAGGGACTTCTTGGATGTCTTGATTGACTTTCAAAGCACCAACAGTCAAGAAGCACTCAACGTTTCAGATAAAGATCTCAACATTTTCATATTGGAAATGTTCTTGGCTGGGTCAGAAACAACGAGCAGCACAATAGAGTGGGCCATGACGGAGCTTCTGTGCAACCGGGAGTGTCTGTTGAAGGTGAAAAGGGAGCTGAGTTGGGTGGTTGGGTGCGGAAGAGAAGTTGAAGAGAGCGACATAGACAAGCTTCCGTACCTGCAAGGTGTGGTTAAGGAAACACTTCGCTTACATCCTCCGATTCCGTTGCTTGTCCCTCGCAAGGCCACGGAGGACACAGAGTTCATGGGATATTACATACCCAAAGACACGCAGGTTTTCGTGAACGCGTGGGCGATTGGGAGAGACCCCAGCGCCTGGGATGAACCATTGGTCTTCAAGCCCGAGCGATTTTCTGAGAATAATAATATTGATTACAAGGGGCACCACTTCGAGTTTATTCCGTTCGGGGCTGGAAGAAGAATGTGTGCGGGTGTGCCTTTGGCGCATAGAGTGCTTCACTTGGTGCTGGGATCATTGCTTCACCGTTTCGATTGGGAACTTGACTGCCACGTCACGCCCTCCACCATGGACATGAGGGACAAGCTCGGCATAACCATGCGAAAGTTTCAGCCCTTGCTCGCCGTCCCAAAATTAATTGTCTCTTCCTCCTGA 1551 0.5397 MGWTSEHPSLFLLLLSLSLPLFLFLLRRRNSKTSSSNHRLPPGPPGWPVFGNMFQLGDMPHRTLTNLRDKFGPVVWLKIGAMNTMAILSAEAATVFFKHHDHAFADRTITEIMRVHNYDKSSLALAPYGPYWRLMRRLVTVDMLVSKRINDTASIRRKCVNDMINWVAKEASKSEHGRGVHVSRFVFLMTFNLFGNLMLSRDLFDPESEDGSEFFSAMMGLMEWTGHANVTDLFPWLSWLDPQGLRRKMDRDMGKALGIASRFVKQRLEQQLHRGTNKSRDFLDVLIDFQSTNSQEALNVSDKDLNIFILEMFLAGSETTSSTIEWAMTELLCNRECLLKVKRELSWVVGCGREVEESDIDKLPYLQGVVKETLRLHPPIPLLVPRKATEDTEFMGYYIPKDTQVFVNAWAIGRDPSAWDEPLVFKPERFSENNNIDYKGHHFEFIPFGAGRRMCAGVPLAHRVLHLVLGSLLHRFDWELDCHVTPSTMDMRDKLGITMRKFQPLLAVPKLIVSSS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1596 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Gso3g1596 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 Gene3D Cytochrome P450 25 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 512 - -
Gso3g1596 516 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 SUPERFAMILY Cytochrome P450 36 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g1596 516 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1596 Gso-Chr3 41886062 41889006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1596 33 509 Cytochrome P450 AT3G52970 44.556 6.53e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1596 K22983 - gmx:100785241 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1596 3 41886062 41889006 Gso3g1596 3 41886062 41889006 ECH