Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1595 ATGAAAAAAGTTTGTCATTGTCCCATATTCCTGGCACTGGCCTTGGCCTTGTGCTTGTGCATCCTCTGTGTTGCTGCAGAGGCTGCAGGGCAAAATGATACACTCGCTCTCACCGAATTCCGTCTCCAAACCGACACCCACGGCAACCTCCTCACCAACTGGACCGGCGCCGACGCCTGCTCCGCCGCGTGGCGCGGCGTGGAATGCTCCCCAAACGGCAGAGTAGTGGGCCTCACTCTCCCTTCCCTCAACCTCCGCGGCCCAATTGATACCCTCTCCACACTAACCTACCTTCGCTTTCTCGACCTCCACGAAAACCGCTTAAACGGCACCATTTCACCTCTCTTAAACTGCACAAGCCTGGAACTACTGTACCTCTCCCGCAACGATTTCTCCGGCGAGATTCCGGCGGAGATATCCTCGCTCCGCCTTCTCCTCCGCCTTGACATCTCCGACAACAACATCCGCGGCCCAATCCCCACACAACTAGCGAAACTAACCCACCTCCTCACGTTGAGGTTACAGAACAACGCACTCTCCGGCCACGTCCCCGACCTTTCCGCTTCCCTCCTTAATCTCACCGTACTCAACGTCACCAACAACGAACTCCGCGGCCACGTCCCCGATTCCATGCTCACCAAATTCGGCAATGTAAGCTTCTCCGGAAACCACGCCCTCTGTGGGTCCACCCCGCTACCCAAATGCTCCGAAACAGAGCCAGACACAGAGACTACCACGATAACCGTTCCTGCAAAACCGAGCTCGTTCCCGCAAACAAGTAGCGTAACCGTTCCTGACACTCCGAGAAAGAAAGGGTTGAGCGCCGGTGTCATCGTGGCGATCGTGGTGGCGGTTTGCGTGGCGGTGCTGGTGGCGACGTCGTTCGCGGTGGCGCATTGTTGCGCCAGAGGATCCACCTCTGGTTCGGTGGTGGGGAGCGAGACCGCGAAGAGAAAAAGTGGGAGTAGTTCTGGGAGCGAGAAGAAGGTGTATGGGAACGGTGGAAACTTGGATAGAGATAGTGATGGGACGAACACTGAGACGGAACGAAGCAAGCTTGTGTTTTTCGATAGGAGGAACCAGTTTGAGTTGGAGGATCTGCTTCGAGCTTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGAACGGTTTACAGAGCGGTGCTCGATGATGGTTGCACTGTGGCTGTGAAGAGACTCAAAGACGCTAACCCCTGCGAGAGGAACGAGTTTGAACAGTACATGGATGTTGTAGGGAAGCTCAAGCACCCCAACATTGTTAGACTAAGAGCTTATTATTACGCTAAGGAAGAAAAACTTCTTGTCTATGATTATCTCCCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGGGGACCAGGAAGGATTCCGTTAGATTGGACCACGAGAATAAGCTTGATGTTAGGTGCAGCTAGAGGTTTGGCACGGATTCATGCGGAGTATAACGCATCAAAGATACCTCACGGGAACGTGAAATCTTCCAACGTGCTTCTTGACAAAAACGGCGTCGCTTTAATATCTGACTTTGGCCTTTCGCTGCTTTTAAACCCTGTTCACGCGATTGCAAGGTTGGGAGGGTACAGGGCGCCGGAGCAAGTTGAGGTGAAGAGGCTGTCGCAGGAGGCTGACGTGTACGGCTTCGGGGTGCTACTGTTGGAGGTTCTGACGGGTCGGGCTCCGTCGAAGGAGTACACTTCTCCGGCGCGTGAGGCTGAGGTGGATCTTCCGAAGTGGGTGAAATCGGTGGTGAAAGAAGAGTGGACTTCGGAGGTGTTTGACCAGGAGCTGCTGAGGTACAAGAACATAGAGGATGAGTTGGTGGCGATGCTGCACGTGGGACTGGCGTGCGTGGCGGCGCAGGCGGAGAAGAGGCCGTGCATGTTGGAGGTTGTGAAGATGATTGAGGAGATCAGAGTGGAAGAGTCTCCTCTGGGAGATGATTACGATGAGGCTCGCTCGCGCACTTCGCTTTCGCCTTCCCTTGCCACCACCGAAGACAACCTCGCTTGA 2031 0.548 MKKVCHCPIFLALALALCLCILCVAAEAAGQNDTLALTEFRLQTDTHGNLLTNWTGADACSAAWRGVECSPNGRVVGLTLPSLNLRGPIDTLSTLTYLRFLDLHENRLNGTISPLLNCTSLELLYLSRNDFSGEIPAEISSLRLLLRLDISDNNIRGPIPTQLAKLTHLLTLRLQNNALSGHVPDLSASLLNLTVLNVTNNELRGHVPDSMLTKFGNVSFSGNHALCGSTPLPKCSETEPDTETTTITVPAKPSSFPQTSSVTVPDTPRKKGLSAGVIVAIVVAVCVAVLVATSFAVAHCCARGSTSGSVVGSETAKRKSGSSSGSEKKVYGNGGNLDRDSDGTNTETERSKLVFFDRRNQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLMLGAARGLARIHAEYNASKIPHGNVKSSNVLLDKNGVALISDFGLSLLLNPVHAIARLGGYRAPEQVEVKRLSQEADVYGFGVLLLEVLTGRAPSKEYTSPAREAEVDLPKWVKSVVKEEWTSEVFDQELLRYKNIEDELVAMLHVGLACVAAQAEKRPCMLEVVKMIEEIRVEESPLGDDYDEARSRTSLSPSLATTEDNLA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1595 676 MobiDBLite consensus disorder prediction 235 267 - -
Gso3g1595 676 SUPERFAMILY L domain-like 32 227 - -
Gso3g1595 676 Pfam Protein kinase domain 373 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1595 676 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Gso3g1595 676 MobiDBLite consensus disorder prediction 306 330 - -
Gso3g1595 676 MobiDBLite consensus disorder prediction 652 676 - -
Gso3g1595 676 MobiDBLite consensus disorder prediction 234 269 - -
Gso3g1595 676 MobiDBLite consensus disorder prediction 305 346 - -
Gso3g1595 676 PANTHER LRR RECEPTOR-LIKE KINASE 1 666 - -
Gso3g1595 676 ProSiteProfiles Protein kinase domain profile. 369 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1595 676 CDD STKc_IRAK 375 644 - -
Gso3g1595 676 SUPERFAMILY Protein kinase-like (PK-like) 373 642 IPR011009 -
Gso3g1595 676 MobiDBLite consensus disorder prediction 661 676 - -
Gso3g1595 676 Gene3D Phosphorylase Kinase; domain 1 339 444 - -
Gso3g1595 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 666 - -
Gso3g1595 676 Gene3D Ribonuclease Inhibitor 92 243 IPR032675 -
Gso3g1595 676 Gene3D Ribonuclease Inhibitor 26 91 IPR032675 -
Gso3g1595 676 Gene3D Transferase(Phosphotransferase) domain 1 445 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1595 Gso-Chr3 41872165 41874666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1595 31 672 Receptor kinase-like Gene Family AT2G36570 65.455 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso3g1595 Pkinase 3.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1595 - - gmx:100808402 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1595 3 41872165 41874666 Gso3g1595 3 41872165 41874666 ECH
Gso19g1576 19 44686648 44689397 Gso3g1595 3 41872165 41874666 GST
Gso3g1595 3 41872165 41874666 Gso10g0564 10 6360361 6363869 PCT
Gso10g0564 10 6360361 6363869 Gso3g1595 3 41872165 41874666 PCT