Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1593 ATGGAACCCAATGCACTAGGTGGTGGAATATTTCCTAACATAAGTAGTGGTTTGCTAGGAGTAGAAAACCCTTTACAACAACAACCAAACCTTCAAAACCAGCAAAACCCCCACCCTTTGCACCATCTCCAAATGGTTTCCTACACCACTAACCACGACACTGACACACACCATCAACAACCACCACCTCAGCAATCAATCAAACATGGCTACAACTTTTCGGCCACTAAATCCAACAAGTCACAAATCACACTCAGTGATGAAGATGAACCAGTGTTCACAGCAGAAGACAATAGCTCCGGAGACCCCAAGAGAAAAGTGTCACCATGGCATAGAATGAAGTGGACGGACACCATGGTAAAGTTCTTAATAATGGCGGTTTATTACATTGGAGACGAGGCTGGTTCAGAAGGCACTGACCCCACCAAGAAGAAAGCCTCTGGGTTGCTTCAAAAGAAAGGGAAATGGAAATCAGTGTCAGGGGGCATGATGGAGAAGGGTTACTATGTGTCTCCTCAGCAATGTGAAGACAAGTTCAATGACTTGAACAAGAGATACAAGAGGGTCAACGACATCCTAGGCAAGGGCACAGCATGTCGGGTGGTGGAGAACCAAACCTTGTTGGACACTATGGATCTGTCACCAAAGATGAAGGAAGAAGTTCGAAAGCTCCTCAACTCAAAGCACTTGTTCTTCAGAGAAATGTGTGCTTACCATAACAGTTGTGGCCACAACAACAACAACAACTGTGGCAGTACTTCCAACGTGCAACAATCAACTGATCAGCCACTACATCAACATAACCATCAACAGCAGCAGTGTTTGCACTCATCAGAAAATGGGGTGGGGAGTCTAAGAATGTTGAAAGAGGATGAGGATGAGGATATTGAGGACGATGATTCGGATGAGTTTTCTGATGAGGATGAAGATGAATCAGGAGAAGGAGGATCAAGGGGTATGGAGGAGGATGAAAATGATCATGTGATGAGGAAGAGAGCAAGGAATAAGGGAGGTTTCGGTGTTTCATCGATATCATCACAGATGATGCAGCAGTTGAATGGTGAAGTGAGTGGTGTGTTGCAAGATGGAGGGAAGAGTGCTTGGGAGAAAAAGCAGTGGATGAAGAAGAAGGTGGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAAGCGTTTGAGATGGAAAAGCAGCGGTTGAAGTGGGCGAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAAAGATAAGCTTCAAAATGAAAGGAAGAGGTTGGAAATAGAAAGAATGGTCTTGCTACTTCGCCATAAGGAGCTTGAATTGGTTAATGTTCAGCAGCAGCATCAACAGCAACATTCTTCTACCTAG 1368 0.4503 MEPNALGGGIFPNISSGLLGVENPLQQQPNLQNQQNPHPLHHLQMVSYTTNHDTDTHHQQPPPQQSIKHGYNFSATKSNKSQITLSDEDEPVFTAEDNSSGDPKRKVSPWHRMKWTDTMVKFLIMAVYYIGDEAGSEGTDPTKKKASGLLQKKGKWKSVSGGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHNNNNNCGSTSNVQQSTDQPLHQHNHQQQQCLHSSENGVGSLRMLKEDEDEDIEDDDSDEFSDEDEDESGEGGSRGMEEDENDHVMRKRARNKGGFGVSSISSQMMQQLNGEVSGVLQDGGKSAWEKKQWMKKKVVQLEEQQVSYQMQAFEMEKQRLKWARFSSKKEREMEKDKLQNERKRLEIERMVLLLRHKELELVNVQQQHQQQHSST* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1593 455 MobiDBLite consensus disorder prediction 51 107 - -
Gso3g1593 455 PANTHER F16F4.11 PROTEIN-RELATED 1 455 - -
Gso3g1593 455 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 455 - -
Gso3g1593 455 MobiDBLite consensus disorder prediction 291 317 - -
Gso3g1593 455 Coils Coil 408 435 - -
Gso3g1593 455 MobiDBLite consensus disorder prediction 291 328 - -
Gso3g1593 455 Pfam Myb/SANT-like DNA-binding domain 112 237 IPR044822 -
Gso3g1593 455 MobiDBLite consensus disorder prediction 51 88 - -
Gso3g1593 455 Gene3D - 115 188 - -
Gso3g1593 455 MobiDBLite consensus disorder prediction 253 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1593 Gso-Chr3 41857631 41859631 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso3g1593 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1593 - - gmx:100808934 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1593 3 41857631 41859631 Gso3g1593 3 41857631 41859631 ECH
Gso3g1593 3 41857631 41859631 Gso10g0561 10 6339415 6341426 PCT
Gso10g0561 10 6339415 6341426 Gso3g1593 3 41857631 41859631 PCT