Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1578 ATGTTTTATAGAATGTCCATTTTTCCAACAATGGGATTTCAGCAGGACACAGTTGTTCTGATACCTCCTTGGCTTGAACAACTTCTTCACACACCCTTCTTCAACGTGTGTCGGATTCACGCTGACGCCGCTAGAAGCGAATGTAACATGTTTTGCATAGATTGCAATGGTGAAGCCTTTTGCTTTTATTGCCGTTCTTCAAGACACAAAGATCATCAAGTCATTCAGATAAGGCGATCTTCCTATCACGATGTAGTGAGGGTCTCAGAAATCCAGAAAGTGTTGGACATCAGTGGAGTGCAGACATATGTAATCAACAGTGCTCGAGTTTTGTTCCTGAATGTGAGGCCTCAGCCAAAATCTGGAAAAGGAGTAGCTCAGATTTGTGAGATTTGTGGAAGGAGCCTCTTGGACCCAGTTCGGTTTTGCTCTTTGGGATGTAAGCTTGAAGGAATAAAGAAAAATGGGGATGCAAGCTTTGCTTTGGATGGTAGGAATGAAGAATTGACAATGGATACTTCAAGGGGATCAGTCTCGTCAAGACAGCAAGAAGAAGGATTGCGTGAAGGTTCAACACAAGACATGTATTCATCCACGCCTTCTCCACCTTCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGCTCCTAA 666 0.4339 MFYRMSIFPTMGFQQDTVVLIPPWLEQLLHTPFFNVCRIHADAARSECNMFCIDCNGEAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNVRPQPKSGKGVAQICEICGRSLLDPVRFCSLGCKLEGIKKNGDASFALDGRNEELTMDTSRGSVSSRQQEEGLREGSTQDMYSSTPSPPSSNARRRKGIPHRAPFGS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1578 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 220 - -
Gso3g1578 221 MobiDBLite consensus disorder prediction 171 206 - -
Gso3g1578 221 Pfam PLATZ transcription factor 78 149 IPR006734 -
Gso3g1578 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 220 - -
Gso3g1578 221 SUPERFAMILY B-box zinc-binding domain 34 79 - -
Gso3g1578 221 MobiDBLite consensus disorder prediction 166 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1578 Gso-Chr3 41745581 41747776 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso3g1578 PLATZ 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1578 - - gmx:100803076 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1558 19 44550220 44552484 Gso3g1578 3 41745581 41747776 GST
Gso3g1578 3 41745581 41747776 Gso10g0546 10 6120446 6122505 PCT
Gso10g0546 10 6120446 6122505 Gso3g1578 3 41745581 41747776 PCT