Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1559 ATGGTTCTAAATAGCCTCATCACTTCAGCACCCTTTATCCACACAACAACAAAAAAAGTGTTTGGTTCCAAAATACAACAAGAGTGCAAAATGGTGGTGGCAGACTTCACTAGTGGTGGTTTGAGGGGAATGAAGGCCCTCAGCTACCATGTTCTCACGGGGCGTTGGTTCATGCTATTTGCATCTTTACTCATCATGTCCGTTGCAGGAGCAACCTACATGTTTGGAATATACTCTAACGAGGTCAAAACCTCATTAGGGTACGACCAATCCACTCTCAACTTGCTAAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCCGGGTTGGTCAACGAGGTAACACCACCTTTCGTGGTGCTCTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATTTCTTGCTGTCTCTGGCCGCATTGACAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACTTTTGCCAATACTGGTGCTTTAGTCACGTGTGTGAAAAACTTCCCTGGAAGCCGTGGCAGTATCTTAGGCATACTCAAAGGCTACGTTGGTCTAAGTGGTGCCATCATCACACAACTCTACCATGCTTTCTATGGTGATCATGACTCTCAAGCTCTTATTTTACTCATTGCGTGGCTCCCTGCTGCTGTTTCCTTCCTTTTTCTTCCAACAATTCGGTTAATGAACACAGTGCACCACCAACCCAAGGAGGACAACAGAGTTTTCTACCACCTTCTATATATTTCACTTGGCCTTGCTGCTTTTCTCATGGTTCTGATCGTTGTACAAAACAAGCTTAGTTTTTCAAGGATTGAATACATAGTAGATGGCCTTGTGGTTTTCTCCTTTCTTCTTCTACCACTTGCTGTGGTGTTTAGAGAGGAGATAAACCAATTGAAAGCCAAAACGCAAGGTTTAACTGATTCACCACCTCAGTTGAAAGTAGTCACTGAAGCTATTCCATCTTCAAACGTGGTGGAGCAAGAAGTAGTACCAGCAGCTACTACAAGTTCCCACGAGAAAAGTTCTTGTTTAAGGAACATATTCAACCCTCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCTTTATTTAGTATTGATATGCTGATTTTGTTCATTGCAACAACCTTTGGTGCTGGAGGAACATTAACAGCCATAGACAACCTGGGACAGATTGGACACTCATTAGGATACCCGAACAAAAGCACTACAACATTTGTTTCCTTAGTGAGCATATGGAACTACTTGGGACGAGTAGCTTCAGGTTATGCCTCTGAGATCTTCTTGACCAAATACAAAGTCCCTCGCCCCTACATGCTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGCCATGTTCTGATAGCCCTTGGTGTTCCAAACTCTCTCTACTTAGCTTCTGTGGTCATAGGGTTTTGTTTTGGAGCTCAATGGCCACTAATGTTTGCAATCATATCAGAAGTATTTGGCCTCAAATACTACTCCACGTTGTACAACTTTGGAGCTGCTGCAAGCCCTCTTGGGTCTTACATTCTGAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACTATTGAAGGCCAAAGGACTCACGAGACAAGAAGGAAAGGACTTAACATGTGTGGGAGTGCAATGCTACAAAATGGCTTTTATCATAATCACGGCTTCAACGTTGGTTGGTTGTTTTGCTTCGATCATTTTGGCGCTGAGGACTAGAAAGTTTTACAAAGGGGATATCTATAGAAAGTTTAGAACGGAAGATGAAACAATAGAGAATGAGATAGAGATTACCAAGGCTTGTAATTAA 1851 0.4268 MVLNSLITSAPFIHTTTKKVFGSKIQQECKMVVADFTSGGLRGMKALSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLVNEVTPPFVVLSIGVIMNFFGYFMIFLAVSGRIDKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGILKGYVGLSGAIITQLYHAFYGDHDSQALILLIAWLPAAVSFLFLPTIRLMNTVHHQPKEDNRVFYHLLYISLGLAAFLMVLIVVQNKLSFSRIEYIVDGLVVFSFLLLPLAVVFREEINQLKAKTQGLTDSPPQLKVVTEAIPSSNVVEQEVVPAATTSSHEKSSCLRNIFNPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYASEIFLTKYKVPRPYMLTLVLLLSCVGHVLIALGVPNSLYLASVVIGFCFGAQWPLMFAIISEVFGLKYYSTLYNFGAAASPLGSYILNVKVAGVLYDKEALKLLKAKGLTRQEGKDLTCVGVQCYKMAFIIITASTLVGCFASIILALRTRKFYKGDIYRKFRTEDETIENEIEITKACN* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1559 616 SUPERFAMILY MFS general substrate transporter 55 593 IPR036259 -
Gso3g1559 616 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 38 614 - -
Gso3g1559 616 Pfam Nodulin-like 55 303 IPR010658 -
Gso3g1559 616 CDD MFS_Mch1p_like 54 576 - -
Gso3g1559 616 Gene3D MFS general substrate transporter like domains 355 589 IPR036259 -
Gso3g1559 616 PANTHER MFS TRANSPORTER 38 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1559 Gso-Chr3 41529709 41531959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1559 44 601 Nodulin-like Gene Family AT2G39210 66.726 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1559 - - gmx:100797779 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1559 3 41529709 41531959 Gso20g0895 20 38481521 38483665 ECH
Gso3g1559 3 41529709 41531959 Gso3g1559 3 41529709 41531959 ECH
Gso19g1539 19 44319871 44321977 Gso3g1559 3 41529709 41531959 GST
Gso3g1559 3 41529709 41531959 Gso13g1124 13 25854609 25856935 PCT
Gso13g1124 13 25854609 25856935 Gso3g1559 3 41529709 41531959 PCT