Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1544 ATGGGTAAAACATTTAGTAGTAATAGTAGTCGCTGTTCTTGGGGATTGTGGATGGGAGGGTTTGGAGTAGTAGTGGAGCCTATGATGAGGAAACTACAAAGCACTTTCTCACGTCCAAAAGGGGTTATCAAGCAGGGTCATTTTGTGGTGATTGCAACACAAGGGTGGAAGCCAGAGAGGTTCTCTATTGAGTTGGAGTTTTTGGATCACCCAGACTTTGTCAAGTTGTTAAAGCAAGCTGAAGAAGAGTTCGGGTTCTCTCAGGTGGGAGCCCTTGCAATTCCTTGCGAACCAGATGACCTCAAGAGAATTATTGCAAGGAAAAAGAATAGGAACAAGGGTATTGCTATTTCCTGTTGGGTTAAAGGGATAAGAGTTGCTTGA 384 0.4375 MGKTFSSNSSRCSWGLWMGGFGVVVEPMMRKLQSTFSRPKGVIKQGHFVVIATQGWKPERFSIELEFLDHPDFVKLLKQAEEEFGFSQVGALAIPCEPDDLKRIIARKKNRNKGIAISCWVKGIRVA* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1544 127 Pfam Auxin responsive protein 37 106 IPR003676 GO:0009733
Gso3g1544 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 119 IPR003676 GO:0009733
Gso3g1544 127 PANTHER SMALL AUXIN-UP RNA-RELATED 18 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1544 Gso-Chr3 41339335 41339825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1544 42 118 Calmodulin-binding Proteins AT2G24400 36.364 3.01e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1544 - K14488 gmx:100816753 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1526 19 44149444 44149812 Gso3g1544 3 41339335 41339825 GST