Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1543 ATGGAGGTTGGAAAGAAGAAGATGATGCTCAAGTCTTTGATCAAAAAGGTGATAAAGGGTCTTCCATTATTCTTGGCACCAAATGGAGTACGTAGTACGAGAAGGGTTTGTTATATGAGTGACATTGATGAGGAAAATGAACATGCAACAAAGGTGCCAGAAGATGTTAAAGAAGGACACTTTGCGGTTATAGCAATGCATGGTGAAGAAACAAAAAGGTTCGTTGTTGAGTTAGATTATTTAACCGATCCTGCTTTCTTGAAGCTGCTGGAGCAAGCAAGGGAAGAGTATGGCTTTCAACAGAAGGGTGCACTTGCAGTTCCCTGCACCCCCGAAGAACTTCAGAAGATTATAGAGAATCGACCACTGCGTAATTAA 378 0.4153 MEVGKKKMMLKSLIKKVIKGLPLFLAPNGVRSTRRVCYMSDIDEENEHATKVPEDVKEGHFAVIAMHGEETKRFVVELDYLTDPAFLKLLEQAREEYGFQQKGALAVPCTPEELQKIIENRPLRN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1543 125 PANTHER F8A24.8 PROTEIN 9 121 - -
Gso3g1543 125 Pfam Auxin responsive protein 34 118 IPR003676 GO:0009733
Gso3g1543 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1543 Gso-Chr3 41331400 41332135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1543 40 119 Calmodulin-binding Proteins AT5G20810 40.000 3.20e-14 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1525 19 44138473 44139240 Gso3g1543 3 41331400 41332135 GST