Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1509 ATGGCCGATGACTTCGACTTCGCGGATAAAGTTCCTCCTTCATTCGATCGCGTGGGAAATGTGATCAAGGATTCTGGATCCAAAGGGTTCAATCCAGGATTAATTGTCCTCCTGGTTGTTGGTGGATTGTTGTTGACATTCCTCATTGGAAATTATGTGCTCTACAGTTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 270 0.4481 MADDFDFADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1509 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso3g1509 89 MobiDBLite consensus disorder prediction 64 89 - -
Gso3g1509 89 Pfam DNA binding protein S1FA 26 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gso3g1509 89 MobiDBLite consensus disorder prediction 65 79 - -
Gso3g1509 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1509 Gso-Chr3 40974712 40976362 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gso3g1509 S1FA 1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1509 - - gmx:100499820 161.77