Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1502 ATGGGGAGGAAGGGGAATTGGTTTTCCAGTGTGATGAAAGCTCTCAGTCCTGACTCAAAGGAGAAGAAAGAACAGAAATCAAGTAAATCTAAGAAGAAATGGTTTGGGAAGCAAAAATCGGAGACTTCAGTCTCATACTCAGAAGCTCATAAAGCACCACCACCACCGCGACCTATTCCTCCACCAGAAGCGATTAAATTAACTGATATTGAAAATGAAATCAGTCATGATCACGACTATGTTGTTGAAGTTGCAACTGCCATGGATGCCGAGGAACCTGTTCCTTCTGTTCAGATAGAACCTGTTAGGGTTGAAGCTGCCCCAATTGCTCATTATGCTGGTAAACCAAAGGATGAAGTGGCAGCTATCAAAATTCAAACAGCTTTTCGTGGATACTTGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAAATTATTGATGGAAGGGCCAGTTGTTAAACGCCAAGCCACAAGTACCCTCCACTCTATGCAGACATTATCTCGCTTGCAGTCTCAGATTCGTTCAAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAGACAGCTCTTACAGAAGCATGCAAGAGAGCTTGAGAGCTTGCGGATGGGAGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATCGAAGCCAAGTTACTTAGCAAGTATGAAGCTACTACGAGAAGAGAAAGAGCGCTGGCTTATGCATTCACTCATCAGCAAAATTGGAAGAACTCATCTAGATCTGTAAATCCAATGTTCATGGATCCAACCAATCCAAGCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCCCGACCTTGGGAGAGCCGTAGCCATATGGATAAAGAGTTGAATGACCACTCATCCGTAAGAAGCTCAAGCCGCAGTATTACCGGTGGAGAAATCAGCAAGTCATTTGCTCGTTTCCAGCTCAATTTGGAAAAGCACTCTCCAACAGCCTGCCAGAATCCTGGCTCACCTAGCTTTCAGTCCACTCCTTCCAAGCCAGCTTCAATATCTGCTAAGAAACCAAAGAAGGTAAGTCCAAGCCCAAGGGGCAGCTGGGTTACAGACGAGGACTCCAAAAGCTTGGTCAGTGTACAGTCAGACCGGTTCCGGAGGCACTCCATTGCCGGTTCATTGGTGAGAGATGATGAGAGCCTTGCTAGCTCTCCAGCAGTTCCAAGCTACATGGTGCCAACTCAATCTGCAAAAGCCAAGTCCAGGACACAAAGTCCATTAGCCCCAGAAAATGGAAAAGCAGAGAAAGGTTCCTTTGGGAGTGCGAAGAAGCGGCTTTCTTTCCCAGCTTCACCTGCCAGGCCAAGGCGCCATTCAGGTCCACCAAAGGTAGAAAGCAGCAGCTTAAATGCAGAGTTAGCTGTGGACAAGGGTGTGGACAGTTGA 1434 0.4728 MGRKGNWFSSVMKALSPDSKEKKEQKSSKSKKKWFGKQKSETSVSYSEAHKAPPPPRPIPPPEAIKLTDIENEISHDHDYVVEVATAMDAEEPVPSVQIEPVRVEAAPIAHYAGKPKDEVAAIKIQTAFRGYLARRALRALRGLVRLKLLMEGPVVKRQATSTLHSMQTLSRLQSQIRSRRIRMLEENQALQRQLLQKHARELESLRMGEEWDDSLQSKEQIEAKLLSKYEATTRRERALAYAFTHQQNWKNSSRSVNPMFMDPTNPSWGWSWLERWMAARPWESRSHMDKELNDHSSVRSSSRSITGGEISKSFARFQLNLEKHSPTACQNPGSPSFQSTPSKPASISAKKPKKVSPSPRGSWVTDEDSKSLVSVQSDRFRRHSIAGSLVRDDESLASSPAVPSYMVPTQSAKAKSRTQSPLAPENGKAEKGSFGSAKKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGVDS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1502 477 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Gso3g1502 477 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515
Gso3g1502 477 MobiDBLite consensus disorder prediction 1 62 - -
Gso3g1502 477 SMART iq_5 117 139 IPR000048 GO:0005515
Gso3g1502 477 Gene3D - 102 143 - -
Gso3g1502 477 MobiDBLite consensus disorder prediction 403 424 - -
Gso3g1502 477 MobiDBLite consensus disorder prediction 326 347 - -
Gso3g1502 477 MobiDBLite consensus disorder prediction 326 374 - -
Gso3g1502 477 MobiDBLite consensus disorder prediction 394 477 - -
Gso3g1502 477 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Gso3g1502 477 Pfam Protein of unknown function (DUF4005) 391 453 IPR025064 -
Gso3g1502 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1502 Gso-Chr3 40924998 40929168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1502 1 465 IQD Protein Family AT5G03040 52.331 1.37e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1502 - - gmx:100777223 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1502 3 40924998 40929168 Gso3g1502 3 40924998 40929168 ECH
Gso19g1488 19 43724944 43729383 Gso3g1502 3 40924998 40929168 GST
Gso3g1502 3 40924998 40929168 Gso10g0435 10 4624828 4628567 PCT
Gso10g0435 10 4624828 4628567 Gso3g1502 3 40924998 40929168 PCT