Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1497 ATGGAGAGTATCTTACTCTTCTTCTCATCATTCAAGTTCGCACTCTCGCTCTCACTCATACTCCACTCACCTTTTTCCTCTGCTCAGATCATGCAAGCAGGTTTTGTAAGTTTGGACTGTGGAGGTACAGAAAAATTTGCTGATGAAATTGGTCTTCATTGGACTCCTGATGATAAACTTACTTATGGACAAATAAGCACTATATCAGTTGTAAATGAGACAAGGAAGCAATATACAACACTTCGACACTTTCCCGCTGATTCCAGGAAATACTGTTATACTCTTGAAGTTGTTAGCAGGACGAGATACCTATTGAGGGCCAGCTTCTTATACGGGAACTTTGACGATAACAATGTTTATCCAAAATTTGACATTTCTATTGGGCCTACGCATTGGTCTACTATTGTTATATCTGATGCTAATAGCATAGAAATGCGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTAAGTGTATGCTTATCGAATGCAACAACAGGACAACCATTCATATCTACGCTAGAACTTCGGCAATTCAACGGTTCAGTTTACTATACACAATTTGAGGAACACTTTTATCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGATTCTGTGAAGAAAGCTAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACAACAGTACCAATCGATGTCAACAGAGATGAAATGCCTCCGGTAAAAGTGATGCAAACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCGGGTACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGGATCCCAATGAATCTAGAAAATTCAGGCTAGTACTTCCGGGTCAGCCAGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATATATCTTTACCCTTTGTGCTTTCTTTTAGATTTGGCAAGACATATGATTCTTCTAGGGGACCTCTCCTTAATGCCATGGAGATAAACATGTATTTGGAGAAAAATGATGGTTCTCTAGATGGAGCAACTATTTCCAATATACTTTCACACTACTCTGCAGAAGACTGGGCCCAAGAAGGTGGTGATCCATGTTTGCCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAACCAAGAATAGTTTCAATATTGTTATCCAATAAAAACTTGACTGGAAATATTCCTATGGATATCACCAAGTTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTCCATTTCCAGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAATCAATTGACAGGCGTGCTCCCAACCTCTTTGACAAACCTTCCTAGCTTGAGAGAACTGTATGTGCAAAATAATATGTTATCAGGAACAATACCATCAGAACTTCTAAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCACAGAGAAAGCAGAATAAAGGGACACATGTATGTTATTATTGGTTCATCAGTTGGAGCTTCTGTTCTACTTTTGGCTACTATTATATCTTGCTTGTATATGCGTAAAGGGAAGAGAAGATATCATGAGCAAGATCGCATTGATTCTCTCCCTACTCAAAGGCTGGCTTCTTGGAAGAGCGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTCCGGAAATTGAAAATGCTACAAATAACTTTGAGACAAAAATTGGTTCTGGTGGTTTTGGAATTGTATACTATGGCAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAACGAGGTTACCCTTCTTTCAAGAATACATCACAGAAATTTGGTACAGCTGCTTGGGTATTGCCGAGATGAAGAGAGTAGTATGCTTGTTTATGAGTTCATGCATAATGGCACTCTCAAGGAACATCTTTATGGCCCATTAGTGCATGGACGGAGTATCAATTGGATTAAGCGCCTAGAGATTGCAGAAGATGCTGCCAAAGGAATTGAATATCTTCATACAGGTTGCATTCCTGTCGTTATCCATAGAGACTTAAAAAGCAGCAATATTCTTCTCGACAAGCACATGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAACTTGCTGTTGATGGAGTTTCCCATGTTTCAAGCATAGTTCGGGGGACAGTAGGATATTTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCGAATGAAAGCTTTGGTGTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAGGGTATTATCGACCCCTTGCTGCGGAATGACTATGACCTTCAATCGATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAGCCCCACGGACATATGCGGCCAACGATTTCAGAAGTTATAAAGGAGATCCAAGATGCAATATCTATTGAGAGACAGGCAGAAGCATTAAGAGAAGGCAATTCAGATGACATGTCAAAACATTCTTTTCATTCTTCCATGAACATGGGGTCAATGGATCTAGGTGGAGCTGAGAGTTACCTGTCAATTGATGAATCAATTGCACAGCCCACAGCAAGATAG 2802 0.3951 MESILLFFSSFKFALSLSLILHSPFSSAQIMQAGFVSLDCGGTEKFADEIGLHWTPDDKLTYGQISTISVVNETRKQYTTLRHFPADSRKYCYTLEVVSRTRYLLRASFLYGNFDDNNVYPKFDISIGPTHWSTIVISDANSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTTVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLDPNESRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISNILSHYSAEDWAQEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNKNLTGNIPMDITKLVGLVELWLDGNMLTGPFPDFTGCMDLKIIHLENNQLTGVLPTSLTNLPSLRELYVQNNMLSGTIPSELLSKDLVLNYSGNINLHRESRIKGHMYVIIGSSVGASVLLLATIISCLYMRKGKRRYHEQDRIDSLPTQRLASWKSDDPAEAAHCFSFPEIENATNNFETKIGSGGFGIVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEESSMLVYEFMHNGTLKEHLYGPLVHGRSINWIKRLEIAEDAAKGIEYLHTGCIPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLRNDYDLQSMWKIAEKALMCVQPHGHMRPTISEVIKEIQDAISIERQAEALREGNSDDMSKHSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1497 933 SUPERFAMILY L domain-like 406 520 - -
Gso3g1497 933 Gene3D Phosphorylase Kinase; domain 1 581 680 - -
Gso3g1497 933 Gene3D Ribonuclease Inhibitor 381 532 IPR032675 -
Gso3g1497 933 Gene3D Transferase(Phosphotransferase) domain 1 681 903 - -
Gso3g1497 933 ProSiteProfiles Protein kinase domain profile. 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1497 933 CDD STKc_IRAK 611 878 - -
Gso3g1497 933 PANTHER OS07G0107800 PROTEIN-RELATED 19 933 - -
Gso3g1497 933 SUPERFAMILY Protein kinase-like (PK-like) 590 875 IPR011009 -
Gso3g1497 933 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Gso3g1497 933 PANTHER TYROSINE KINASE DOMAIN PROTEIN 19 933 - -
Gso3g1497 933 SMART serkin_6 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g1497 933 Pfam Leucine rich repeat 462 502 IPR001611 GO:0005515
Gso3g1497 933 Pfam Protein tyrosine and serine/threonine kinase 607 822 IPR001245 GO:0004672|GO:0006468
Gso3g1497 933 Pfam Malectin-like domain 38 367 IPR024788 -
Gso3g1497 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1497 Gso-Chr3 40883037 40890265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1497 25 715 Receptor kinase-like Gene Family AT2G37050 69.054 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso3g1497 Malectin_like 1.1e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1497 - - gmx:100808740 1864.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1482 19 43673786 43681151 Gso3g1497 3 40883037 40890265 GST
Gso3g1497 3 40883037 40890265 Gso10g0426 10 4537098 4544282 PCT
Gso10g0426 10 4537098 4544282 Gso3g1497 3 40883037 40890265 PCT