Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1486 ATGGCAACTCCGAGTGTGTTAGAAGTCCGCACTCCTGCTTTAACTTCCATCTCTGAACCACTTCCATTTTTTGATGGAACCACAAGGTTATACATTTGCTATCTGTGCCCTTTTGCACAACGCGCATGGATAACTAGGAACTGTAAGGGACTGCAAGACAAGATCGAATTGGTTCCTATTGATCTTAAAAACAGGCCTGCTTGGTATAAGGAAAAAGTTTATCCCACGAATAAGGTACCTTCGTTGGAGCACAATAGCAAGGTTTTAGGAGAAAGTCTTGATTTGATAAGATATATAGATGCCAACTTTGAAGGGGCACCTCTATTCCCCACTGATCCTGCCAAGAGAGAATTTGGTGAGCAGTTGATATCCCATGTTGATACGTTCACCAGTGGCATATACCCTACATTTAAAGGAGATCCTATACAACAAACCAGTGCTGCTTTTGATTACCTGGAGAATGCTCTTGGTAAATTTGATGATGGACCATTTTTCCTTGGCCAATTTAGTTTGGCGGATATTGCCTATGTTTCATTTCTTGAAAGGTTCCAAATTGTCTTCTCTGAAATTTTTAAGCACGACATCACAGCAGGAAGACCCAAACTAGCCACATGGATTCAGGAGGGGAATAAGATCGATGGTTATAAGCAGACAAAAGTTGACAGGGAGGAATATCTGGAAGCTTTCAAGAAAAAGTTTTTGGCTTAA 708 0.4096 MATPSVLEVRTPALTSISEPLPFFDGTTRLYICYLCPFAQRAWITRNCKGLQDKIELVPIDLKNRPAWYKEKVYPTNKVPSLEHNSKVLGESLDLIRYIDANFEGAPLFPTDPAKREFGEQLISHVDTFTSGIYPTFKGDPIQQTSAAFDYLENALGKFDDGPFFLGQFSLADIAYVSFLERFQIVFSEIFKHDITAGRPKLATWIQEGNKIDGYKQTKVDREEYLEAFKKKFLA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1486 235 CDD GST_C_Lambda 112 230 - -
Gso3g1486 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 234 IPR044629 GO:0004364
Gso3g1486 235 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Gso3g1486 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Gso3g1486 235 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 234 - -
Gso3g1486 235 Gene3D - 105 235 - -
Gso3g1486 235 SFLD Main (cytGST) 29 208 - -
Gso3g1486 235 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Gso3g1486 235 Gene3D Glutaredoxin 1 104 - -
Gso3g1486 235 SFLD Glutathione Transferase (cytosolic) 29 208 IPR040079 -
Gso3g1486 235 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Gso3g1486 235 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1486 Gso-Chr3 40785186 40788232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1486 7 234 Glutathione S-transferase Gene Family AT5G02790 64.912 7.24e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1486 K00799 - gmx:100816962 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1472 19 43572228 43574184 Gso3g1486 3 40785186 40788232 GST
Gso3g1486 3 40785186 40788232 Gso13g1038 13 24794791 24797671 PCT
Gso13g1038 13 24794791 24797671 Gso3g1486 3 40785186 40788232 PCT