Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1467 ATGAGAAAGTTGTGTTTTAACCCCAAAACGGAGTCGTTTGCTTTGGCACGCAGTTCTCCTTCTTCGCCACTATCCTTAACCTCAAGCCCAACGCTTCCGAGGCTGAGCTTTTCCGAACCTAGCAGCTTCCACGAAGATATTTTCATCGAAGAAGCTGAGGCACTGATACTCAAATGGAACCCAGACTCTTCCGCTTACGCAAAAGTCACTTCCCTCTTCTACCAAGACAGAAACGAAGCCAAACAATATATTAACTGTGTTAACCAGCTTCAGAAAACTATGCATTCGTTGCTCTCTCAGAACCTTTCCTCTGACAAACTCATCCTCGCTCATAACCTAATGCAGATTGCTATGAAGAGGCTCACGAAAGAGTTCTACCAGATCTTATCCATGAACCGCGCACACCTTGATCCTGAATCCGTCTCCGCCAGATCCTCTCGCACCTCCGCCAATTCCAGCGCCTCCGATTATGACGACGATTTTGCGGCGGAGGACGACGATATCCGCGCCGCCGGCGACTCTATCTCCGAAGTCGAGCAGGTTTCCTCCGGCGCCATGGCGGATCTGAAATTAATCGCTGACTGCATGATATCTTCCGGTTATGCGAAGGAATGCGTCAGCGTCTACATCTTAATTCGAAAATCTATCATCGACGAAGGAATCTACCGCCTCGGCGTGGAGAAACTTAGCTCCTCGCGCGCTAACAAGATGGATTGGGAAGTTCTTGATTTGAAGATCAAGAGTTGGTTAGAGGCGACAAGGATTTCCGTTAGAACACTCTTTAACGGAGAGAGAATACTCTGCGACCACGTCTTCAGTTACTCAGATTCCGTCAGAGAATCATGCTTCGCCGAGATTTCAAGAGACGGTGCCTCTCTCCTTTTCGGATTCCCTGAACTCGTTGCCAAAACAAAGAAATCTTCGCCGGAGAAGCTGTTCCGCGTGCTCGATATGCATGCTGTGGCTTCCGAACTGTTGCCGGAGATCGAGTCTATCTTTTCCTCCGATTACAACTCCGGCGTTCGTTCTCAATTCCTGGTTTCGCTTCAACGACTCACCGAATCGGCGCAAATCTTGCTCGCGGAGTTCGAGTCCACGATCCAGAAAGGCACTTCAAAGCCGGCGGTGAACGGCGGCGGCGTGCACTCGCTCACGATTCAGACGATGAATTACCTTTCAGTCCTCGCCGATTATCTCAACGTGCTCTCGGATATATTTCCGCGCGACTGGCTTCCACCGCAGAAGTCGTCATCTCTGCCGGAATCTTATTTATACAGTCCAGAATCTGATTACTCGGCGTCGACGCCGGCGCTGACGGCGCGTTTTGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAAGCGAAGCATTGCAAGGACGTTTCGCTTTCTTATCTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCCTTAAGCACGAAGCTAAAGCGAAACGGTTCGTTTCGAACTACGAGAAGGTGGCGTGGGGAGAAGTGGTTTCGTCATTGGCGGAAAATCCAGCCGCGGCGGAGGCGAGGGCGGTGTTCGAGAACTTCAACCGCAAATTCGAGGAAGCGTATCGGAAACAGAACTCATTCGTCGTAGCTGACAGAGAATTAAGAGACGAAATAAAAGGTTCGATCGCGAGAAGTATAGTGCCGAGATATCGCGAGTGGTATAATGTTCTTCTAGCTAAGGTTGGATCAGTGAGGGACTTGACGGCGACGGAGTACGTGACGTTTACCCCTGAGGATATTGAAAATTACCTCGTTAACCTCTTCTTTTTTGGAACCTCATCCAGTGCTGTATCGTCCTCGTCGGTATCGTCGTCCCCTCTCCGGCGTTGGAGTTAA 1908 0.5052 MRKLCFNPKTESFALARSSPSSPLSLTSSPTLPRLSFSEPSSFHEDIFIEEAEALILKWNPDSSAYAKVTSLFYQDRNEAKQYINCVNQLQKTMHSLLSQNLSSDKLILAHNLMQIAMKRLTKEFYQILSMNRAHLDPESVSARSSRTSANSSASDYDDDFAAEDDDIRAAGDSISEVEQVSSGAMADLKLIADCMISSGYAKECVSVYILIRKSIIDEGIYRLGVEKLSSSRANKMDWEVLDLKIKSWLEATRISVRTLFNGERILCDHVFSYSDSVRESCFAEISRDGASLLFGFPELVAKTKKSSPEKLFRVLDMHAVASELLPEIESIFSSDYNSGVRSQFLVSLQRLTESAQILLAEFESTIQKGTSKPAVNGGGVHSLTIQTMNYLSVLADYLNVLSDIFPRDWLPPQKSSSLPESYLYSPESDYSASTPALTARFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWILKHEAKAKRFVSNYEKVAWGEVVSSLAENPAAAEARAVFENFNRKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNVLLAKVGSVRDLTATEYVTFTPEDIENYLVNLFFFGTSSSAVSSSSVSSSPLRRWS* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1467 635 Pfam Exo70 exocyst complex subunit 247 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso3g1467 635 MobiDBLite consensus disorder prediction 140 156 - -
Gso3g1467 635 Gene3D Exocyst complex component Exo70 65 620 - -
Gso3g1467 635 SUPERFAMILY Cullin repeat-like 50 612 IPR016159 -
Gso3g1467 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 619 IPR004140 GO:0000145|GO:0006887
Gso3g1467 635 MobiDBLite consensus disorder prediction 140 160 - -
Gso3g1467 635 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1467 Gso-Chr3 40659689 40662007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1467 49 612 EXO70 exocyst subunit family AT3G09520 55.478 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1467 K07195 - gmx:100810548 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1455 19 43435491 43437525 Gso3g1467 3 40659689 40662007 GST
Gso3g1467 3 40659689 40662007 Gso10g1115 10 32523300 32541698 PCT
Gso10g0400 10 4237742 4239894 Gso3g1467 3 40659689 40662007 PCT