Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1465 ATGCAGAGACCTAAAGGAAGCAAGCGGGTTCATAGACATAGAAAACTTCAGAGTTTTCCTTCTGATTCAAGTTCTTGCGGTGATGGAGTTGCAGATGAAGATTCGAATTCATTTCAATCCTGGAGATCTTCAAAACAATCGTTTGGAACTCCCATGAAGAAGTTATTAGCAGAAGAACTGTCCCAAGAAACTGAACCCAAAAGAAGAGCTCCAGGTGTCATAGGCAAATTAATGGGTCTTGATGGGTTTCCATTGCAGTTGCCTACATATAAGCATCATAAGGGTGTGTCAGAAAACAATACAAAAGGGACAACACAGGCGGTAAAAACTCGAAGCAGTGGTACATTATCTGGCGGTCGATTGTCTAGGAGAAACTCAAAGCATCAGCAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAAAGATAGATAGCTGTAGGTATTCATTGCAAGGATCTGTAGGGTTGAAGATCACCAATGCTGGGATGTCATTTGTTGAACAGAAGCTCATGGATGCCAAACGCCGAGCAACTTATCAGGATTTACAATCTTCGCAGGATTCCCATGATACACTTGAGATTCTTGACTCTAACCATGATCTTCAGCAAAAATACTTTAAGAGGCCAGATTCTTTGTTTAAAAGGCATCTAGATGATCTGCAAGCTGCCCCTTCCCAATCACATTTTGGTCACGTTGAAGGTACAAAATTATCAAACATAGTGAACTGTGAACACAATGACTTCAGCCGGAAGCCAGATAAGGAGATGAAATGGTTGAATTACAATAGATCTAACCAGAAGCATGATGATGGTTATTCTTGTCATTTTGTCAGAAGACATGCTATTCACAGTTCTCCGAAATCATCAAGGAATCAGTTTAAGGGAAAAAATGTGCCCAATGCAGTCCCAACAAGGATTGTTGTACTAAAACCCAATCTTGAAAAAGTGCAAAGTCCTACCAAAATTGGTTCATCACCTTGTTCTCCATATGCTTTCCTGTCTCAATGTGGAAAGCATGCTGAATTTTCAGATATCAGATTTAGGGAAACTGGACTGAATCAAAGGAAAAATTTGACTGCTAATGCCTGGCATTCAAAGCAAAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAATTTGAATATTGGCTCCATGATATTTTCATCTTCTAGATTTAGAGGATATACTTGGGATGATAGCTCATGTAGTCTTTCTGGGAATCAATCTCCTGATGAATCAGAGGTGACACCTGCAACCTTGGAAAAGTCATTTGAAATATGTAATACTATTAGTCCATCATCTTGTTTTAGTGAATCATTTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCGCTGAAGTTTCAACAAGGCAATTCCATCTCCAGGAGTGGCACACTGGCTGAAATGCTCGCTATCCCTAACAAGGAAATGAAGGCATCTAAATTTGACAGCATCTCTTGTGGGGAAGGTTCACACGATAAAATATCTAGCAATGGTAAACCTGCTGGGTGGGTCGAACCATTGGGTGTTAGCAGTAAGGATGGATATATTGGAAGTTTACCAAGGTCTAAATCACTTCCTGCTTCATCTACTACCTTTGGAAGTCCCAGAACAATATTGCACCATGAAGCACTTTGTGATGATCGATTTATGATGCCAAAGGAAGCTAGTAAACAGGAAAAGAAAAAAGTAGTGAAGCGTCTTGATCAGAGACCGTGTACAAATACCAAAAGGTCAAAATCTGGTCACAAGAAGTGTTCCCCATACTTAAATACAATTCAAAACAAAGTGAAGATTAATCTTGAAGAGAATTTGCCCAAGCAAGAAGTGTTGATTGCTGAATCATTAGCTGAGATCCTCAGAGATACAAGTGCAGTTACTGAAGAAGTTGTTGGTGTGACCAATGAAAATGCAGTTGGTTCATCTGAATCTTCTATTAAGGAGTTATCAGTTGGGTCTTCCAGTAGAAATTATGACCCCTTGCAACCACCTGTATCTGGACTTGATTCTGCATGCTGTATAGGTGCAGATCATCCCAGTCCAGTCTCGGTGCTAGAACCTTCTTTTACAGATGATCTGTCACCTTGTTTAGATTATTTTGAAAGTCTCAATGTTGACATACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGCTGGAATCTGAAGATTTTGTGGAAGAACCCGTGCTAATTCAAAGTGATGAAGATGGTATGGAGGCATCTACTGGAATTTCAGAAGACAGTGGATTGCTTCAGACTACAGATAGCTGGGAGTCTTCCTACACGATTGATGTCTTGTATGAATCTGGTATTGATAGAGCTCAACCTGATGCATTTTTGGAAGTTGGGGATTCTAGAGAATACCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGGACTAATTGTTCAAGGTCTGAAAGGAGATTGCTTTTTGATCGTATAAATTTGGGAATTATCAGTATATACGAGCAATTCACGAGTGTACAACCATGGGTAAGCTCTACTACATCCTTAAATCTTTGTTCTAAATTGATTAAAAATGGACTCCAAGACTGTCTTAACATGATGCTGGGGAGCCAAGGAAAAGCAAAGTATACCGCAATGGGAAAGGTGCTGGTTAGCGAATTGCAGTGGTTGAGCTTAAGAGATGACATTGATGGAATAGGTAGGGAAGTTGAGAGCTTGCTACTAGATGATCTGGTGGCAGAGATAGCCGTTACATAG 2781 0.3995 MQRPKGSKRVHRHRKLQSFPSDSSSCGDGVADEDSNSFQSWRSSKQSFGTPMKKLLAEELSQETEPKRRAPGVIGKLMGLDGFPLQLPTYKHHKGVSENNTKGTTQAVKTRSSGTLSGGRLSRRNSKHQQEFKDVFEVSEIPKIDSCRYSLQGSVGLKITNAGMSFVEQKLMDAKRRATYQDLQSSQDSHDTLEILDSNHDLQQKYFKRPDSLFKRHLDDLQAAPSQSHFGHVEGTKLSNIVNCEHNDFSRKPDKEMKWLNYNRSNQKHDDGYSCHFVRRHAIHSSPKSSRNQFKGKNVPNAVPTRIVVLKPNLEKVQSPTKIGSSPCSPYAFLSQCGKHAEFSDIRFRETGLNQRKNLTANAWHSKQNSLESREIAKEITSQMKNNLNIGSMIFSSSRFRGYTWDDSSCSLSGNQSPDESEVTPATLEKSFEICNTISPSSCFSESFVSREAKKRLSERWKMSLKFQQGNSISRSGTLAEMLAIPNKEMKASKFDSISCGEGSHDKISSNGKPAGWVEPLGVSSKDGYIGSLPRSKSLPASSTTFGSPRTILHHEALCDDRFMMPKEASKQEKKKVVKRLDQRPCTNTKRSKSGHKKCSPYLNTIQNKVKINLEENLPKQEVLIAESLAEILRDTSAVTEEVVGVTNENAVGSSESSIKELSVGSSSRNYDPLQPPVSGLDSACCIGADHPSPVSVLEPSFTDDLSPCLDYFESLNVDIQGLRMQLQLLKLESEDFVEEPVLIQSDEDGMEASTGISEDSGLLQTTDSWESSYTIDVLYESGIDRAQPDAFLEVGDSREYPVSLSVFDELEKRYSDWTNCSRSERRLLFDRINLGIISIYEQFTSVQPWVSSTTSLNLCSKLIKNGLQDCLNMMLGSQGKAKYTAMGKVLVSELQWLSLRDDIDGIGREVESLLLDDLVAEIAVT* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1465 926 PANTHER AFADIN 6 924 - -
Gso3g1465 926 Coils Coil 713 733 - -
Gso3g1465 926 MobiDBLite consensus disorder prediction 1 15 - -
Gso3g1465 926 MobiDBLite consensus disorder prediction 99 123 - -
Gso3g1465 926 MobiDBLite consensus disorder prediction 19 50 - -
Gso3g1465 926 Pfam Protein of unknown function (DUF3741) 168 212 IPR022212 -
Gso3g1465 926 MobiDBLite consensus disorder prediction 1 54 - -
Gso3g1465 926 MobiDBLite consensus disorder prediction 95 128 - -
Gso3g1465 926 PANTHER AFADIN 6 924 - -
Gso3g1465 926 Pfam Domain of unknown function (DUF4378) 773 922 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1465 Gso-Chr3 40629774 40635747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1465 45 925 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 33.983 1.48e-120 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1465 - - gmx:100801297 1835.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1453 19 43402400 43409128 Gso3g1465 3 40629774 40635747 GST
Gso3g1465 3 40629774 40635747 Gso10g0396 10 4196068 4201956 PCT
Gso10g0396 10 4196068 4201956 Gso3g1465 3 40629774 40635747 PCT