Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1449 ATGACGTCGTTCTTGAAGCCTGAGAATGCTCTGAAAAGGGCGGAAGAATTAATCAATGTTGGGCAGAAGCAGGATGCTTTGCAGACTCTCCATGATCTCATCACCTCAAAGCGATACAGAGCGTGGCAGAAGACACTTGAAAGGATTATGTTCAAGTATGTGGAGCTTTGCGTCGACATGCGAAAAGGCCGTTTTGCAAAAGATGGTCTTATTCAGTATAGAATTATATGTCAACAAGTGAACGTTAGTTCACTGGAGGAGGTCATAAAGCATTTTATGCAGCTTTCTACCGAGAAAGCTGAACAAGCCCGTAGCCAGGCGCAGGCACTAGAAGAAGCCCTTGATGTTGATGATTTAGAGGCCGATAAAAGGCCAGAGGACCTGATGTTGAGCTATGTCAGTGGCGAGAAAGGAAAAGACAGATCTGATCGGGAGACTGTGACCCCATGGTTTAAGTTTCTTTGGGAAACTTATAGGACAGTGCTGGAAATATTGAGGAACAACTCAAAGCTAGAAGCCTTATATGCTATGACAGCTCATCGAGCTTTCCAGTTCTGTAAGCAATATAAGCGGACAACAGAGTTCCGCAGACTGTGCGAAATCATTAGAAATCATTTGGCTAATCTTAATAAATATCGTGACCAACGAGACCGACCTGATCTTTCAGCTCCTGAAAGCTTGCAACTGTATCTTGATACAAGATTTGAGCAGCTGAAAATTGCTACTGAACTTGGACTCTGGCAGGAAGCCTTCAGATCAGTGGAGGATATACATGGACTGATGTGCTTAGTCAAGAAAACACCCAAGCCATCCTTGATGGTTGTTTATTATGTGAAGCTGACAGAAATATTTTGGATATCATCGAGTCATCTGTATCATGCATATGCATGGTTCAAGCTCTTTTTATTACAAAAAAGCTTCAATAAGAATCTGAGTCAGAAAGATTTGCAATTAATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCTCATGATCACACCCACGGTGCATCTCATTTGGAACTGGAGCATGAAAAAGAGAGAAATTTGAGAATGGCTAATCTCATTGGCTTTAATCTTGAAACTAAACCTGAAAGCAGAGAAATGCTATCAAGGTCATCACTTCTTGCTGAACTGGCATCCAAGGGTGTGATGTCTTGTGTGACTCAGGAAGTGAAGGACATTTACCATCTTTTGGAACATGAGTTTTATCCCTCAGATCTTGCATTAAAAGCGCTGCCCTTAATAACTAAAATCTCTAAGTTAGGGGGTAAGCTTTCTACTGCATCATCTGTTCCAGAGGTGCAATTAGCTCAGTATGTTCCAGCACTCGAAAGACTGGCTACCATGAGGTTGCTGCAGCAGGTGTCTAATGTGTACCAATCTATGAAGATTGAAACCTTATCGGGGATGATCCCCTTCTTTGATTTCTCTCAAGTGGAAAAGGTTTCGGTAGATGCTGTTAAGCAGAAGTTTGTATCGATGAGAGTTGACCACATGAAAAATGCTGTGATTTTTTGCAAAAAGAGTCTTGAGTCTGATGGCTTAAGGGATCACTTGGCCAATTTTGCTGAACAATTAAATAAAGCAAGACAGATGATTTATCCTCCTGATAGGAGATCATCAAAACTTGGAGCTTTACTTCCCTCTTTGACAGAGGTTGTGGCCAAAGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAAAGGAAAGAAGAACAAGAACGACAGCTTCTTGAAATGGAACGGGAGGAGGAGTCGAAGAGGCTAAGACTGCTGAAAATAACTGAAGAAGCGGAACAAAGAAGGCTTGCCACTGAGTTTGAGCAGAGGAAAAATCAGAGGATCCTCAGGGAGATAGAGGAGAGAGAAAATGAAGAAGCACAAGCATTACTCCAGGAAGCTGAAAAGCGTATTAAAAAGAAGGGAAAGAAACCAATCATAGAGGGGGACAAAATCACCAAGCAGACATTGATGGAGTTGACTTTGACTGAACAACTCCGGGAAAGACAGGAAATGGAAAAGAAACTGCAGAAGTTAGCAAAAACCATGGATCATTTGGAAAGAGCAAAAAGAGAAGAGGCTGCTCCCCTGATTGAAGCTGCATATCAACAGCGTCTAGTGGAAGAGAGACTTCTTCATGATCGTGAGCAGCAGCAAGAGGTTGAACTGAGCAAACAGAGGCACGAGGGAGATCTCAAGGAGAAGGAGAGGCTTGTTCGCATGATGGGCAATAAGGAGATATATCAAGCAAGGGTGGTTAGTCACCGCCAAGCAGAGTTTAACAGATTGAGAAGAGAACGGGAAGAGCGAATCTCTAGGATTTTACAGTCCAGGAGACAGGAGAGGGAAAAAATGAGGAAGTTGAAGTATTATCTCAAGTTAGAAGAAGAGAGACAACAAAAATTGCATGAGGAGGAGGAAGCTCGGAAACGTGAAGATGCTGAAAGGAAAAAGAAGGAAGAAGAGGAACGCTTGCGGAAATTGGAGGAGATAGCTGAAAAGCAGAGGCAGAGAGAAAGGGAACTTGAAGAAAAAGAGAAACAAAGGAGAGAAGCATTGTTGGGTAGAGCTGCTGCTGAACCAGCTCCTCCTGCCCGTCCATTGGAATCGGGATCTGCTGCTCCTGCTGCAGCTGCAGCTGCCGCCGCAGCTCCAACACCAGGGAAATATGTCCCTAAGTTCAGGCGACAGAGAACTGAAAGCACAGGAGCTGCGCCTCCTCCAGAGACAGACCGTTGGAACAGTAGCAGCAGGCCAGATGGTGGTGACAGGTGGCGTGGTGATGATCGGAAAAGTGCATTTGGTTCTGGTGGAGGTTCAAGGTCATCTTCTACTTGGACATCTTCCAGGAATGCCCGTTGA 2877 0.4397 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMQLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRETVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELGLWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYVKLTEIFWISSSHLYHAYAWFKLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTHGASHLELEHEKERNLRMANLIGFNLETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYHLLEHEFYPSDLALKALPLITKISKLGGKLSTASSVPEVQLAQYVPALERLATMRLLQQVSNVYQSMKIETLSGMIPFFDFSQVEKVSVDAVKQKFVSMRVDHMKNAVIFCKKSLESDGLRDHLANFAEQLNKARQMIYPPDRRSSKLGALLPSLTEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLLKITEEAEQRRLATEFEQRKNQRILREIEERENEEAQALLQEAEKRIKKKGKKPIIEGDKITKQTLMELTLTEQLRERQEMEKKLQKLAKTMDHLERAKREEAAPLIEAAYQQRLVEERLLHDREQQQEVELSKQRHEGDLKEKERLVRMMGNKEIYQARVVSHRQAEFNRLRREREERISRILQSRRQEREKMRKLKYYLKLEEERQQKLHEEEEARKREDAERKKKEEEERLRKLEEIAEKQRQRERELEEKEKQRREALLGRAAAEPAPPARPLESGSAAPAAAAAAAAAPTPGKYVPKFRRQRTESTGAAPPPETDRWNSSSRPDGGDRWRGDDRKSAFGSGGGSRSSSTWTSSRNAR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1449 958 MobiDBLite consensus disorder prediction 804 958 - -
Gso3g1449 958 Gene3D - 352 495 - -
Gso3g1449 958 Gene3D - 269 342 - -
Gso3g1449 958 SMART PINT_4 441 532 IPR000717 -
Gso3g1449 958 MobiDBLite consensus disorder prediction 921 936 - -
Gso3g1449 958 Pfam PCI domain 373 508 IPR000717 -
Gso3g1449 958 Coils Coil 667 697 - -
Gso3g1449 958 Gene3D UVR domain 217 268 - -
Gso3g1449 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 904 - -
Gso3g1449 958 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 958 IPR027512 GO:0005852
Gso3g1449 958 MobiDBLite consensus disorder prediction 941 958 - -
Gso3g1449 958 Coils Coil 610 649 - -
Gso3g1449 958 MobiDBLite consensus disorder prediction 804 859 - -
Gso3g1449 958 Coils Coil 93 120 - -
Gso3g1449 958 Coils Coil 561 595 - -
Gso3g1449 958 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Gso3g1449 958 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 904 IPR027512 GO:0005852
Gso3g1449 958 Coils Coil 796 857 - -
Gso3g1449 958 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1449 Gso-Chr3 40497612 40504424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1449 1 955 Eukaryotic Initiation Factors Gene Family AT4G11420 72.453 0.0 1321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1449 K03254 - gmx:100803796 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1439 19 43273415 43279770 Gso3g1449 3 40497612 40504424 GST