Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1443 ATGCATATGGCGTTGAACATAACATCCATCAAAGCATCCTCAAACGGAGTGTGGCAAGGCGACAACCCTTTGGACTATGCCTTCCCACTCCTCATAGTCCAAACCATCTTGGTCCTCGCCGTCAGCCGCTCCCTCGCTTTCCTCCTCAAACCTCTCCGACAACCCAAAGTTATAGCTGAGATTGTCGGTGGAGTTTTGCTGGGCCCATCAGCGTTGGGAAGAAACAAAAGTTATTTGCACCGTATATTCCCTTCATGGAGCATGCCCACGCTTGAATCTGTAGCCAGCATAGGCCTTCTTTTTTTCCTCTTCCTTGTGGGTCTGGAGCTTGATCTCCACTCCATTCGCCGGAGCGGCAGAAAAGCATTCTGCATCGCCGCCGTCGGGATCTCTCTCCCCTTCATATGCGGCATCGGCGTCGCCGTCATCCTCCGCAAAACCGTGGACGGCGCCGACAAAGCCGGGTTCCCGCAGTTCCTCGTCTTCATGGGAGTCGCCCTTTCCATCACCGCATTCCCTGTGCTCGCGCGCATCCTAGCGGAGCTCAAGCTCCTCACCACGCGCGTGGGAGAGACCGCCATGGCCGCGGCGGCGTTCAACGACGTCGCCGCGTGGATCCTACTCGCCCTGGCCGTAGCCCTCGCGGGAGACGGCGGAGGACACAAGAGCCCCCTCGTGTCGGTCTGGGTTCTCCTCTCCGGCCTCGGGTTCGTCGTCTTCATGATTGTGGTTATTCGACCCGCGATGAAGGTTGTCTCTCGTAAGGGCGAAAACGACGCCGTTGACGAGATTTATGTCTGTTTAACGTTGGCGGGGGTGCTGGCGTGCGGTTTCGTAACTGACCTTATAGGGATTCATTCTATATTCGGGGCTTTTGTGTTCGGGTTAACGGTTCCGAAGAATGGGAGCTTCGCGAGGAGGTTGATGGAGAGGATCGAGGATTTTGTGTTGGGCTTGTTGCTGCCGTTATACTTTGCCTCTAGCGGGTTGAAGACTGATGTAACTACGATTCGTGGCGGTGCGGCGTGGGGGCTTCTTTGTCTGGTGATATTCACGGCGTGTGCTGGGAAGATTCTAGGGACTTTCGTGGTGGCCATGTTTTGCATGATCCCCGCCAGAGAATCGCTCACGCTTGCCGTGCTCATGAACACCAAAGGACTCGTAGAGCTTATCGTACTCAACATTGGCAAAGAGAAAAAGGTTTTGAACGATGAAATGTTCGCAATCTTAGTACTCATGGCTCTATTCACCACTTTCATGACAACTCCAATAGTGATGAGCATCTACAAAGCAGCGAAGACCCAACGGAAGCTAGGAGACATTAATTCCTTGAGTTCCAAGGTAAATGAGTTCCGAGTCTTGGCATGTATCCACGGCCCAAACAACATCCCTTCCATAATCAGTTTCATCGAATCATCTCGCAGCACCACCAAGTCCCTTCTGAAGCTGTTCATGGTGCATCTCGTTGAGCTCTCAGAGCGCTCTTCCTCCATCACCATGGTTCAACGCGCACACAAGAACGGTTTCCCTTTCTTCAGCCGGTCCCACCGTGACACGTGGCAGGATCGCCTCGCTGGCGCGTTTCAGGGCTACGGTCAACTGGGCCAAGTCAAAGTCCGGTCAACCACCGCCATCTCTTCTCTCTCCACGATGAATGAGGACATTTGCCACGTGGCGGAGGATAAGAGGGTGACCATGATCATCTTGCCGTTTCACAAACAGTGGAGGATGGAAATGGATGAGGATAATAATAATGAGAACTGTCGTGTGTTGGAGAATGTGGGCCACGAATGGAGACTGGTGAACCAAAGGGTGCTTAAGAATGCGCCTTGTTCGGTGGCGGTGCTTGTGGACCGTGGATGTGGCAATCTGCCTCAGACTCCAAGCCCAATTGTGGCCCAACGCGTATGCATCATCTTCTTTGGTGGGCCCGATGATCGTGAAGCCCTAGAGCTGGGGAAGAAAATGATTGAACACCCAGCAGTTAAAGTACGTGTTGTGAGGTTTGTTGAAAAGGATGACCTGATGAATGGAAATGACACTGTGTTAAGCTTCTCACATGACGAAAATGGTGACAAGAGTTACAGCTTCTCCACTGCTAAAATGAACCACCAGAAAGAAAAGGAATTGGATGAGAAGGCCGTGGGAAATTTTCGAAGCAAGTCGAATGAAATGGTGGAATATGTTGAGAAGGTTAGTGAGAACATTGTGGAAGAAGTAATAGTAATAGGGAGTAGTGGAGATTATGATCTTATAATTGTTGGGAAGGGTCGATTTCCGTCGAATATGGTGGCTGGATTGGCAGAAAGACAAGCAGAGCACGCCGAGTTAGGCCCCATTGGAGATGTTTTAACATCATCGGAAAATGTGGTGTCATCAGTTATGGTTATTCAACAACATGATGTAGCGTCGGTAGATGATGCTCCTGTATATAAGGTGCATGGAAAGCACGACAAGGTCAACGATAGTGATTCATCCCATAAGGTTGGGATTTCAATATCAAACGACAACGTAGTGTAA 2520 0.5099 MHMALNITSIKASSNGVWQGDNPLDYAFPLLIVQTILVLAVSRSLAFLLKPLRQPKVIAEIVGGVLLGPSALGRNKSYLHRIFPSWSMPTLESVASIGLLFFLFLVGLELDLHSIRRSGRKAFCIAAVGISLPFICGIGVAVILRKTVDGADKAGFPQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWILLALAVALAGDGGGHKSPLVSVWVLLSGLGFVVFMIVVIRPAMKVVSRKGENDAVDEIYVCLTLAGVLACGFVTDLIGIHSIFGAFVFGLTVPKNGSFARRLMERIEDFVLGLLLPLYFASSGLKTDVTTIRGGAAWGLLCLVIFTACAGKILGTFVVAMFCMIPARESLTLAVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFMTTPIVMSIYKAAKTQRKLGDINSLSSKVNEFRVLACIHGPNNIPSIISFIESSRSTTKSLLKLFMVHLVELSERSSSITMVQRAHKNGFPFFSRSHRDTWQDRLAGAFQGYGQLGQVKVRSTTAISSLSTMNEDICHVAEDKRVTMIILPFHKQWRMEMDEDNNNENCRVLENVGHEWRLVNQRVLKNAPCSVAVLVDRGCGNLPQTPSPIVAQRVCIIFFGGPDDREALELGKKMIEHPAVKVRVVRFVEKDDLMNGNDTVLSFSHDENGDKSYSFSTAKMNHQKEKELDEKAVGNFRSKSNEMVEYVEKVSENIVEEVIVIGSSGDYDLIIVGKGRFPSNMVAGLAERQAEHAELGPIGDVLTSSENVVSSVMVIQQHDVASVDDAPVYKVHGKHDKVNDSDSSHKVGISISNDNVV* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1443 839 Gene3D - 30 438 IPR038770 -
Gso3g1443 839 PANTHER BNAC06G14930D PROTEIN 5 814 - -
Gso3g1443 839 PANTHER CATION/H + ANTIPORTER 5 814 - -
Gso3g1443 839 Gene3D - 480 778 - -
Gso3g1443 839 Pfam Sodium/hydrogen exchanger family 37 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1443 Gso-Chr3 40451377 40456383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1443 77 813 Antiporter Super Family AT3G53720 65.828 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1443 - - gmx:100798644 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1443 3 40451377 40456383 Gso3g1443 3 40451377 40456383 ECH